ggKbase home page

S15_scaffold_239_curated_23

Organism: S15_RifCSP_Pseudomonas_62_25_curated

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(26807..27730)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) RepID=Q4KEB2_PSEF5 similarity UNIREF
DB: UNIREF100
  • Identity: 85.9
  • Coverage: 305.0
  • Bit_score: 514
  • Evalue 4.70e-143
  • rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:BAQ73994.1}; TaxID=1500686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Os17.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.0
  • Coverage: 301.0
  • Bit_score: 517
  • Evalue 7.80e-144
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 85.9
  • Coverage: 305.0
  • Bit_score: 514
  • Evalue 1.30e-143
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas sp. Os17 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 924
ATGTCGACTCCCGATCTGAATCTGCTGCTGACCCTGGACGTACTGCTGAGCGAAGGCAGTGTGGCCCGGGCCGCCCTGCGCCTGAACCTGAGCCCGTCGGCCATGAGCCGGGCCCTGTCCCGCCTGCGCCAGGCCACCGGTGACCCGTTGCTGGTCCGCGCCGGACGCGGCCTGGTGCCCACGCCCCGGGCACTGGAACTGCGCCAGCAAGTCGGACCGCTGGTGGAGCAAGCTCAAGCCGCCCTGCGCCCGGCCGAGCAGATCGACCTCAGGCAACTGGTGCGCACCTTCACCCTGCGCAGCCGCGACGGTTTCGTCGAGAACTTCGGCCCGGCCCTGGTCAACCGCCTGCGGGCCGAAGCGCCCGGGGTACGGGTGCATTTCGTGCCCAAGCTGGACCGCGACAGCAAGCCCCTGCGCGAGGCCAGCGTCGATCTGGAAACCGCAGTGATCGATGCCGACACCAGCCCCGAGTTGCGCACCCGGGCGCTGTTTCGCGATCGCTTTATCGGCGTGGTGCGCAGCGACCACCCCTTGAGCCGCGGCCCGGTGAGTCTCGACCACTACCTGGCCGGCCAGCACATCCTGGTGTCCCACCAGGGGCACGACCATAGCCGCATGGACGATACGCTGCAGGCCCTGGGCCGGCAGCGGCAGATCGTCACCCTGGTCAGCGGTTTTTCCGCGGCCCTGGCCCTGGCCCGGGGTTCGGACCTGATCGCCTTGGTGCCCGAACGCCACACCAGCAACCTGCGAGAAGGCCTGCACAGTTTCCGCCTGCCGGTACCGCTGCCGGAACTGACCATTTCCCTGCTCTGGCACCCGCGCATGGAGGCCGACCCGGCCCATCGCTGGTTGCGCCAATGCGTCCACGAACTCTGTAGCGACACCACAGATACCCTACCCGGCGGCCACCACCGCTGA
PROTEIN sequence
Length: 308
MSTPDLNLLLTLDVLLSEGSVARAALRLNLSPSAMSRALSRLRQATGDPLLVRAGRGLVPTPRALELRQQVGPLVEQAQAALRPAEQIDLRQLVRTFTLRSRDGFVENFGPALVNRLRAEAPGVRVHFVPKLDRDSKPLREASVDLETAVIDADTSPELRTRALFRDRFIGVVRSDHPLSRGPVSLDHYLAGQHILVSHQGHDHSRMDDTLQALGRQRQIVTLVSGFSAALALARGSDLIALVPERHTSNLREGLHSFRLPVPLPELTISLLWHPRMEADPAHRWLRQCVHELCSDTTDTLPGGHHR*