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S15_scaffold_239_curated_26

Organism: S15_RifCSP_Pseudomonas_62_25_curated

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(31064..32296)

Top 3 Functional Annotations

Value Algorithm Source
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=1500686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Os17.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.1
  • Coverage: 410.0
  • Bit_score: 802
  • Evalue 2.80e-229
Diaminopimelate decarboxylase n=2 Tax=Pseudomonas protegens RepID=Q4KEA8_PSEF5 similarity UNIREF
DB: UNIREF100
  • Identity: 95.6
  • Coverage: 410.0
  • Bit_score: 792
  • Evalue 2.00e-226
  • rbh
lysA_1; diaminopimelate decarboxylase similarity KEGG
DB: KEGG
  • Identity: 95.6
  • Coverage: 410.0
  • Bit_score: 792
  • Evalue 5.80e-227

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Taxonomy

Pseudomonas sp. Os17 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1233
ATGGCCATTCCCTTCTCTCCTGCTCAACTCGTCGCCGCTGCCCGCCAATATGGCACTCCACTGTGGTGCTATGACGCCGCCACCATCCAGGCGCGCATTGCCCAACTGCAGGCCTTCGACGTGGTGCGCTACGCCCAGAAAGCCTCGTCCAACCTGCACCTGCTGCGCCTGATCCGCGAGGCCGGGGTACGGGTCGACGCCGTATCCCTGGGAGAAATCGAGCGTGCCCTGCTGGCCGGTTTCAGCCCGGTGGATGCCGGCATCGTCTTCACTTGCGACCTGTTCGACGAGGCCACCCTCAAGCGCGTGGTGGAACTGCAAGTGGAGGTCAACGCCGGCTCCATCGACATGCTCCGTCAACTCGGGGAGCAGTCCCCGGGGCACCGGGTCTGGCTGCGGATCAACCCGGGCTTCGGCCACGGCCACAGCCGCAAGACCAACACTGGCGGCGAGAACAGCAAACACGGCATCTGGCACGATCAGGTCGGCGAAGCCCTGGCGGTGATCCGCCAGTACGGCCTGCACCTGGTAGGCCTGCACATGCACATCGGTTCCGGGGTCGACTACGACCACCTGGAGCAAGTGGGCGCGGCCATGGTGACGGCGGTGAAATCCCTGGACCACGACATCGAGGCGTTCTCCATTGGTGGCGGCCTGTCCACCCCTTACCGCGACGGTGACACCGCGGTGGACGTGCAGCGCTACGCCAACGCCTGGAGCGTTGCGCGCCGGGAGATCGAGGCCTACCTGGGCCACGGCGTGCGCATGGAAATCGAGCCCGGACGTTTCCTGGTGGCCGAGGCCGGTTGCCTGGTCAGCGAAGTACGGGTGGTGAAGACCGCCGGCCAGCACCACTTCGTGCTGGTGGACACCGGCTTCAACGACCTGATGCGCCCGGCCATGTACGGCGCCTACCACGGCATGAGCCTGCTGGACGCCAGCGGCCAGCCGGTGCAGCGCCCGCAACAGCTGACCGTGGTCGGCGGCCCGCTGTGCGAGTCCGGCGATATCTTCACCCAGGACGACGAATGCCTGACCCCGCGCCTGCTGCCCCAGGCCCAGGTCGGCGACCTGCTGGTGCTGCACGACACCGGCGCCTATGGCGCCAGCATGTCCTCCAACTACAACAGCCGGCCGCTGCTGCCGGAAGTGCTGTTCGCCAACGGCCAGCCACAGCTGATCCGCCGGCGCCAGCCACTGGCGGATTTGCTGGCGCTGGAACTGGGGTTGTAA
PROTEIN sequence
Length: 411
MAIPFSPAQLVAAARQYGTPLWCYDAATIQARIAQLQAFDVVRYAQKASSNLHLLRLIREAGVRVDAVSLGEIERALLAGFSPVDAGIVFTCDLFDEATLKRVVELQVEVNAGSIDMLRQLGEQSPGHRVWLRINPGFGHGHSRKTNTGGENSKHGIWHDQVGEALAVIRQYGLHLVGLHMHIGSGVDYDHLEQVGAAMVTAVKSLDHDIEAFSIGGGLSTPYRDGDTAVDVQRYANAWSVARREIEAYLGHGVRMEIEPGRFLVAEAGCLVSEVRVVKTAGQHHFVLVDTGFNDLMRPAMYGAYHGMSLLDASGQPVQRPQQLTVVGGPLCESGDIFTQDDECLTPRLLPQAQVGDLLVLHDTGAYGASMSSNYNSRPLLPEVLFANGQPQLIRRRQPLADLLALELGL*