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S15_scaffold_239_curated_27

Organism: S15_RifCSP_Pseudomonas_62_25_curated

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 32426..33340

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional activator protein LysR n=1 Tax=Pseudomonas protegens CHA0 RepID=R4R4S0_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 90.5
  • Coverage: 304.0
  • Bit_score: 537
  • Evalue 8.80e-150
  • rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:BAQ80294.1}; TaxID=1500687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. St29.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.1
  • Coverage: 304.0
  • Bit_score: 552
  • Evalue 2.20e-154
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 90.5
  • Coverage: 304.0
  • Bit_score: 537
  • Evalue 2.50e-150

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Taxonomy

Pseudomonas sp. St29 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 915
ATGGACATCTCCCTGCGGCACATCGAAGTATTCCGCGCCATCATGCAGGCCGGCAGCGTCACCGGCGCCGCGCGCCTGCTGTTCACCTCGCAGCCCACGGTGAGCCGCGAACTGGCGCGGCTGGAGGCGCTTTCCGGTCTGCGCCTGTTCGACCGCGAAGGCGGGCGCCTGCTGCCCACGGCCCAGGCCCTGCTGTTGCTTGAAGAGGTCGAGCGGGCTTATGTGGGGCTCGAGCGAATCAACAGCGTGGCCCAGTCGATCCGCCGTTTCGAGCACGGCCAGTTGAGCCTGAGCTGCCTGCCACTGTTCTCCCAGACCCTGCTGCCGCGGGTGTGCCAGCGCTTTTTGCAAGCGCATCCGGGAATCGGCCTGAGCATCACTGCCCAGGAATCGCCGCTGCTGGAAGAGTCCCTCAGCGCCCAGCGCCATGACCTGGGCCTCACCGAAAGCGAGCACCTGCCACGAGGTACTCAAGGGGAACTGCTGTTCTGCGCCGATATGGTCTGCATCCTCCCGGACGATCATCCGCTGTTGGCCAGGCCACGGCTGACTTCGGAGGATTTTCGCGGGCAGAACTTCATCAATCTTTCGGGCCTGGATATCTACCGGCAAACCCTGGACGAGCATTTTCGCCAGGCCGGGGTCGATCGCCGGGTGGTGGTGGAAACCACCAACGCCGCCTCGGTGTGCGCCATGGTGCGCCAGAAACTGGGGGTGGCGATCATCAATCCCCTGAGCGCCATGGAAGAAGTGGGGCGTGGCTTGGCGATCCGTCCGCTGCAGCTGTCGGTGCCGTATCGGGTGATGCTGATCCGCCCGGACTACCGGCCGTCATCGAGTTTTGTCGAGGGCTTTTGCCAGTCGTTGCGAGAGGAAGCGCGGCGCCTGGAGGGGCAGCTACGAAACATCCTATGA
PROTEIN sequence
Length: 305
MDISLRHIEVFRAIMQAGSVTGAARLLFTSQPTVSRELARLEALSGLRLFDREGGRLLPTAQALLLLEEVERAYVGLERINSVAQSIRRFEHGQLSLSCLPLFSQTLLPRVCQRFLQAHPGIGLSITAQESPLLEESLSAQRHDLGLTESEHLPRGTQGELLFCADMVCILPDDHPLLARPRLTSEDFRGQNFINLSGLDIYRQTLDEHFRQAGVDRRVVVETTNAASVCAMVRQKLGVAIINPLSAMEEVGRGLAIRPLQLSVPYRVMLIRPDYRPSSSFVEGFCQSLREEARRLEGQLRNIL*