ggKbase home page

S15_scaffold_7_curated_27

Organism: S15_RifCSP_Pseudomonas_62_25_curated

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(25653..27542)

Top 3 Functional Annotations

Value Algorithm Source
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=1500686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Os17.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.6
  • Coverage: 628.0
  • Bit_score: 1171
  • Evalue 0.0
thrS2; threonyl-tRNA synthetase ThrS (EC:6.1.1.3) similarity KEGG
DB: KEGG
  • Identity: 90.0
  • Coverage: 628.0
  • Bit_score: 1164
  • Evalue 0.0
  • rbh
Threonine--tRNA ligase n=1 Tax=Pseudomonas protegens CHA0 RepID=R4RU36_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 90.0
  • Coverage: 628.0
  • Bit_score: 1164
  • Evalue 0.0
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas sp. Os17 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1890
ATGATCCGCATCACCCTGCCTGATGGCGCGTGCCGTGAGTACGACCAGCCGTTGTCCGTGTTCGAAGTGGCCGCCAGCATTGGCAGCGGCCTGGCCAAAGCCGCCGTGGCCGGACGGGTCGATGGCCGGCTGGTGGACTGTGACTACCTGTTGGACACCGACAGCCGCCTGAGCATCGTCACCGCGACCGATGCCGATGGCCTGGAAGTCCTGCGTCACTCCTGCGCCCACCTGCTGGCCATGGCGGTGAAGCAGCTGTATCCCTCGGCCCAGGTCACCATCGGCCCGGTGATCGAGGACGGCTTCTTCTACGACTTCGCCTACGAGCGCCCTTTCACCCCCGAGGATCTGGAACTGATCGAGGCGCGCATGCACAGCCTTGCCGCCACCAATCACACCTTGCGCCGCCGCGAGCTGTCCCGGGAGCAGGCGCTGCAACACTTCGCCGACCAGGGCGAGCACTACAAGGTCGAGCTGATCCGCGACCTGCCCCCGGAGGCCGTGCTGTCGCTGTACCGCCAGGGCGATTTCGAAGACCTGTGCCGCGGCCCCCACGTGCGTACCACCGGCCAGTTGCGGGCCTTCAAGCTGACCAAGGTGGCCGGCGCCTATTGGCGCGGCGATGCCAGCAACGCGCCGTTGCAACGGATCTACGGCACCTGCTGGGCCACCCGCCAGGATCTGGACGCCTATCTGCTGCGTCAGGAACAGGCCGCCAAGCGCGACCACCGCAAGCTGGGGCAGCAACTGGACCTGTTCCACTTCGACGATTGCGCGCCGGGTTCGGTGTTCTGGCACGCCAAGGGCTGGACCCTGTTCAAGCTGTTGATCGGCTACATGCGCCAGCGCCAGGAACAGGCCGGCTACCAGGAAGTGAACACCCCGGACGTGATGGACCGCAGCCTCTGGGAAACCTCCGGGCACTGGCAGAACTACCGCGACCACATGTTCACCACCAGCACCGAGGATCAGCGCACCTTCGCCCTCAAGCCCATGAACTGCCCCGGCGCGGTGGCGATCTTCGGCCACGGCTTGAAGAGCTACCGCGACCTGCCCCTGCGCATCGCCGAATTCGGCAAGGTCCATCGCTACGAACCTTCAGGGGCACTGCACGGCTTGCTGCGAGTCCGCCACTTCACCCAGGACGACGCCCACATCTTCTGCACCCCGGAACAGATGCAAGACGAATGCGCCCGCACCATCGCCCTGGTGTTCGACATCTATAAGGAGTTCGGTTTCGACGACGTGGCGGTGAAGCTCTCCACGCGCCCGGCCAACCGCATCGGCAGCGACGAGGTCTGGGATCAGCTGGAAAGCGCCCTGGTCGGCGCCCTGCAAAGCATGCAGATCGACTATCGGCTCAACCCGGGAGAAGGCGCCTTCTACGGTCCGAAACTGGAGTTCGTGCTGCGCGACGCCATCGGCCGCGATTGGCAGTGCGGCACCCTGCAAGTGGATCTCAACCTCCCCGAGCGCTTCGCCATCAGCTACATCGCCGACAACGGCGAACGCCGGCAACCGGTGATGCTGCACCGCGCGCTGTTCGGCTCCCTGGAGCGCTTCATCGGCATCCTCATCGAGCACCATGGCGGCGCCCTGCCCTTGTGGCTGGCGCCGCAGCAGGTGGTGGTGCTCAACATCAGCGAAGCTCAGGCGGACTATGCCTGGGAAATCAGCGAACGCCTGCGCCGAGAGGGGCTGCGGTCCAGTGCCGACCTGCGCAACGAAAAGATCGGCTACAAGATCCGTGAGCACAGCCTGCAGAAAGTGCCCTACCTGCTGGTGATCGGGGACAAGGAGAAAGCCGGAGGCTACGTCAGCCTGCGCAGCAGAGATGGCCAGGATCTGGGACAGCTGACGCTGGAGCAGGTAGTGGAACGGATTAGCTAG
PROTEIN sequence
Length: 630
MIRITLPDGACREYDQPLSVFEVAASIGSGLAKAAVAGRVDGRLVDCDYLLDTDSRLSIVTATDADGLEVLRHSCAHLLAMAVKQLYPSAQVTIGPVIEDGFFYDFAYERPFTPEDLELIEARMHSLAATNHTLRRRELSREQALQHFADQGEHYKVELIRDLPPEAVLSLYRQGDFEDLCRGPHVRTTGQLRAFKLTKVAGAYWRGDASNAPLQRIYGTCWATRQDLDAYLLRQEQAAKRDHRKLGQQLDLFHFDDCAPGSVFWHAKGWTLFKLLIGYMRQRQEQAGYQEVNTPDVMDRSLWETSGHWQNYRDHMFTTSTEDQRTFALKPMNCPGAVAIFGHGLKSYRDLPLRIAEFGKVHRYEPSGALHGLLRVRHFTQDDAHIFCTPEQMQDECARTIALVFDIYKEFGFDDVAVKLSTRPANRIGSDEVWDQLESALVGALQSMQIDYRLNPGEGAFYGPKLEFVLRDAIGRDWQCGTLQVDLNLPERFAISYIADNGERRQPVMLHRALFGSLERFIGILIEHHGGALPLWLAPQQVVVLNISEAQADYAWEISERLRREGLRSSADLRNEKIGYKIREHSLQKVPYLLVIGDKEKAGGYVSLRSRDGQDLGQLTLEQVVERIS*