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S15_scaffold_411_curated_24

Organism: S15_RifCSP_Pseudomonas_62_25_curated

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(18822..19697)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, RpiR family/SIS domain protein n=1 Tax=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) RepID=Q4KEM7_PSEF5 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 291.0
  • Bit_score: 581
  • Evalue 3.00e-163
  • rbh
RpiR family transcriptional regulator/SIS domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 291.0
  • Bit_score: 581
  • Evalue 8.40e-164
  • rbh
Transcriptional regulator, RpiR family/SIS domain protein {ECO:0000313|EMBL:AAY91473.2}; TaxID=220664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 291.0
  • Bit_score: 581
  • Evalue 4.20e-163

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Taxonomy

Pseudomonas protegens → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 876
ATGAGCCAGCCCATCAAACAACGCCTTGAAAGCAGCTTGTCCAGCGCCACCGCGTCGGGCCGGGCGATTGCCAGCTACATGCTGGCCAACCTCTACGAACTGCCCTTCCAGACCGCTGCCGACATCGCCGAAAAACTCGGTGTCAGCGAATCCAGCGTCGGCCGTTTCTGCCGCGCCATCGGCTACAGCCATTTCAAGGATCTGAAAAACGACCTGAAGAACGACCTCGGCGAAGGCCCGTGGCTGGTGGGCGACCGCCTGCAGGAATTTCGCCAGCAGCCCAACCCGGCGGCCCAGGGCCTGCCCCGCAGCTTCGAGCTGGAAGTCGGCGCGCTGGTCAAGGTCTACGAATACAGCCTGACCCCGGCCTGGCAGACCGTGGTCCAGCGCCTGGCCAGCCGGCGCCGGGTGTACGTGGCGGGGTTCCAGACCGAGCGCGGCATCGCCGCCTCCATGGTCCACCTGCTGCAATACCTGCGCGACGGCGTGCACCTGGTGGACGGCGCCGCCGGGCATTTCGCCGACGTACTGCTCAGCCCCGCCGAAGACTGCGCCCTGGTGGTGTTCGAGGCCCGGCGCTACTCGCGCCACGCCCTGACCCTGTGCCACAAGGCCCGCGAGGCGGGGATTCCGGTGACCCTGGTCACCGACACTTTCTGCGACTGGGCCGAGCAGAACGCCGACGAGGTGTTCCGCGTGCCCACTGAATTCAACCTGTTCTGGGAGTCCACCGCGGCCATGCTGTCGCTGGTGCACCTGCTGGTCAACGAGGTGTGCAAGCACCTGGGACCCGAGGTGGAAAAACGCCTGGAAGCCACCGCTGCCCTGCATAACGAGTTTGTTGGTTACACATCGTCCGCCCGACCAAAACAATAA
PROTEIN sequence
Length: 292
MSQPIKQRLESSLSSATASGRAIASYMLANLYELPFQTAADIAEKLGVSESSVGRFCRAIGYSHFKDLKNDLKNDLGEGPWLVGDRLQEFRQQPNPAAQGLPRSFELEVGALVKVYEYSLTPAWQTVVQRLASRRRVYVAGFQTERGIAASMVHLLQYLRDGVHLVDGAAGHFADVLLSPAEDCALVVFEARRYSRHALTLCHKAREAGIPVTLVTDTFCDWAEQNADEVFRVPTEFNLFWESTAAMLSLVHLLVNEVCKHLGPEVEKRLEATAALHNEFVGYTSSARPKQ*