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S15_scaffold_96_curated_30

Organism: S15_RifCSP_Pseudomonas_62_25_curated

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(40042..41043)

Top 3 Functional Annotations

Value Algorithm Source
Sigma factor regulatory protein FpvR n=1 Tax=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) RepID=Q4KCM4_PSEF5 similarity UNIREF
DB: UNIREF100
  • Identity: 91.4
  • Coverage: 337.0
  • Bit_score: 628
  • Evalue 2.40e-177
  • rbh
fpvR; sigma factor regulatory protein FpvR similarity KEGG
DB: KEGG
  • Identity: 91.4
  • Coverage: 337.0
  • Bit_score: 628
  • Evalue 6.90e-178
Sigma factor regulatory protein FpvR {ECO:0000313|EMBL:AAY92175.1}; TaxID=220664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.4
  • Coverage: 337.0
  • Bit_score: 628
  • Evalue 3.40e-177

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Taxonomy

Pseudomonas protegens → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1002
ATGAGCGAACAGATCCTCTCAGAAGCCGAATACGACGCCATTACCCAAGCTGCGGCGCAATGGTGCATGCGTTTGCATGAAGCCGACTGCAGCGATGCGGAGCGTCTGGCCTTTCAGCAATGGCATGATGCCGACCCCCTGCACGCTTTCGAATACGAGGCGATGCGGGAGATATGGGAAGTGGCCGATCAACTGCCGCCCTCCACTCTGGCGCCGGCTCCGGTCAAGCCTGCCCCCCGGCGCACCTGGCAGCATTACGGTGCGGCCGCGGCCGTCGCTCTGTGCGCCCTGCCCCTGGCCGCCTACAGCGGTTGGGAACTGGGCTGGCTGCCATCGTCCTACGAACATTTCGAAGCCGGCGACAGCCTGCGCAACGTGACCCTGGCCGACGGCAGCCAGGTGGAACTGAACCTGGGCAGCAGCCTGACCTACAGCAACTACAAGGATCAGCGCCGGGTCACCCTGAAGAAGGGCGAGGCGTTCTTCAAGGTCAGCCACGACAGCAGCCATCCGTTCGTGGTCAAGGCCGCCCAAGGCCAGATCAAGGTCACCGGCACCCAGTTCAACGTGTGGATGTATGAGGATCAGGTACGGGTCACCCTGCTTCAGGGCTCGGTGCTGGTCACCAGCAATACCGCGCTGCCCGGCGAAGGTTTCCGCCTGGAACCGGGCATGCAGGCTCACTACAAGGATGGCGACTACGCGCCGCAGATCAGCCAGACCTACAGCAACGACAGTTCCCTGGCCTGGCGCAACGGCAAACTGGTGCTGGACAACCTGGCCCTCAGCGATGCCCTGCCACTGATCAATCGCTACCTGGACACCCCGGTGCAGCTGGCTGACAGCTCGACCGGCAAGATCCGCGTGGGCGGCATCTACAACACCCGGGAAATCAGGAGCCTGCTGACTTCGTTACCCAAGGTGCTGCCGGTCTACCTGACGCGCAATCGCGACGGCAACCCGGTGATCAATTCGTTGCCCCAGTCCCCGCCAAAAAGCTGA
PROTEIN sequence
Length: 334
MSEQILSEAEYDAITQAAAQWCMRLHEADCSDAERLAFQQWHDADPLHAFEYEAMREIWEVADQLPPSTLAPAPVKPAPRRTWQHYGAAAAVALCALPLAAYSGWELGWLPSSYEHFEAGDSLRNVTLADGSQVELNLGSSLTYSNYKDQRRVTLKKGEAFFKVSHDSSHPFVVKAAQGQIKVTGTQFNVWMYEDQVRVTLLQGSVLVTSNTALPGEGFRLEPGMQAHYKDGDYAPQISQTYSNDSSLAWRNGKLVLDNLALSDALPLINRYLDTPVQLADSSTGKIRVGGIYNTREIRSLLTSLPKVLPVYLTRNRDGNPVINSLPQSPPKS*