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S15_scaffold_715_curated_4

Organism: S15_RifCSP_Pseudomonas_62_25_curated

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(3059..3928)

Top 3 Functional Annotations

Value Algorithm Source
Putative Transcription factor, AraC family n=1 Tax=Pseudomonas brassicacearum (strain NFM421) RepID=F2KJC9_PSEBN similarity UNIREF
DB: UNIREF100
  • Identity: 82.0
  • Coverage: 289.0
  • Bit_score: 492
  • Evalue 1.80e-136
  • rbh
AraC family transcriptional regulator {ECO:0000313|EMBL:BAQ80101.1}; TaxID=1500687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. St29.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.3
  • Coverage: 289.0
  • Bit_score: 583
  • Evalue 1.10e-163
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 95.8
  • Coverage: 289.0
  • Bit_score: 566
  • Evalue 2.80e-159

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Taxonomy

Pseudomonas sp. St29 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 870
GTGCCTGACCTGTCGATCAACGCCGCCTACGCCAAACGCTTCAACGCGGTACTCGCCTACATCAATGAGAACCTTGAAGGCGATCTGTCGGTGAGGACGTTGAGCCGGGTAGCGAACTTCTCCGAGTTTCACTTCCATCGGCAATTCACCGCCTTCGTCGGCGTGCCGGTTGCACGTTATGTGCAACTGATGCGCTTGCGCGGTGCGGCCCATCGCCTGGTGTCCCGGGCGGACCACTCGGTGCTGGAGGCCGCGTTCGGCGCCGGTTTCGAAAGCCCCGAGGCGTTTTCCAGGGCGTTCAGGCGGGCGTTCGGCATGAGCCCGAGTGCGTTCAGGAAGCAGCCGAACTGGCAGGTCTGGAATGCGGTATTTGCCATCCCTCATTTTTCCAGGAGCATCATCATGCAGGTACGAATCGTGGACTTTGCCGACACCCGGGTTGCAGCGCTGGAGCACTGCGGGCCCGCCGAGCTGGTCAATGAAAGCGTGCGCAGGTTTATCGATTGGCGGATGCAGAGCGGGCAGTCGCCGGTGGCATCGAGTCGCAGTTTTGGCATTCCCTTCAACAACCCCGATACCACGGCGCCGCAGGAATTCCGCTTTGCCATCTGCGGCGAGATTCATGAGGCGGTGGTGGCCAATGAGGTGGGTATTGGCGAGATGCAGATTGCCGGTGGCCGCTATGCGGTGGTGCGGCATGTGGGCTCGCCGGATCACATCGGTGAAAGCATCTACCCGATCTACCGCGATTGGCTGCCGGGCAGTGGCGAGGAACTGCGGGATCAGCCGATGTTCTTTGAATACCTGAGTATTTATCCGCAGACCCCACTGGAGCAGTGGCTGACGGATATTTATGTGCCCTTGCAGTAG
PROTEIN sequence
Length: 290
VPDLSINAAYAKRFNAVLAYINENLEGDLSVRTLSRVANFSEFHFHRQFTAFVGVPVARYVQLMRLRGAAHRLVSRADHSVLEAAFGAGFESPEAFSRAFRRAFGMSPSAFRKQPNWQVWNAVFAIPHFSRSIIMQVRIVDFADTRVAALEHCGPAELVNESVRRFIDWRMQSGQSPVASSRSFGIPFNNPDTTAPQEFRFAICGEIHEAVVANEVGIGEMQIAGGRYAVVRHVGSPDHIGESIYPIYRDWLPGSGEELRDQPMFFEYLSIYPQTPLEQWLTDIYVPLQ*