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S16_scaffold_258_curated_2

Organism: S16_Parvibaculum_lavamentivorans_63_43_curated

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38
Location: comp(265..876)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HRP1_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 76.6
  • Coverage: 192.0
  • Bit_score: 287
  • Evalue 1.10e-74
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 76.6
  • Coverage: 192.0
  • Bit_score: 287
  • Evalue 3.00e-75
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.6
  • Coverage: 192.0
  • Bit_score: 287
  • Evalue 1.50e-74

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Taxonomy

Parvibaculum lavamentivorans → Parvibaculum → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 612
ATGCGCCGATTGGATGCGCCATCGGACGATGATCTGGTAGCCGCCGTCGCCAAAGGCGACGAGGCGTCCTGCCGTCTGCTGATGGAGCGGCACCTGCCGCGCATGGTTGCGCTGGCCCGCCGCATGCTGGGCAATCGGGCCGATGCCGAGGATGTGGCGCAGGAGGTCTTCCTGCGCGTCTGGACCCATGCCGAACGCTGGCAGCCGGGCAGGGCGCAATTCGGCACCTGGCTTCACCGTGTGGCCACCAATCTCTGTCTCGACCGGTTGCGCAAGCGCCGGCCCGAAAACATCGACGACATTCCCGAGCCTGTCAGCGCCGATCCGCGCCCGGACGAAAATCTGGAGCACCGCCAATTGGCCGAGCGGGTCGAGGCGGCGCTGCAAACCCTGCCCGAGCGCCAGAGAACGGCAATCGTGCTGTCGCATTATCAGGGCCTCACCAACATCGAGGCCGCGGAAATCCTTGAAGTCAGCGTCGAGGCGGTGGAATCCCTGCTCGGCCGCGCCCGCCGTCATCTTCGCGGCGTGCTGGCGACGGAAAAGGACGAGATCCTGCGTTCAAGAACCGCAAGCGCCACCAAGCGTTTCCAGGTGAAGTGCCTCCTTTGA
PROTEIN sequence
Length: 204
MRRLDAPSDDDLVAAVAKGDEASCRLLMERHLPRMVALARRMLGNRADAEDVAQEVFLRVWTHAERWQPGRAQFGTWLHRVATNLCLDRLRKRRPENIDDIPEPVSADPRPDENLEHRQLAERVEAALQTLPERQRTAIVLSHYQGLTNIEAAEILEVSVEAVESLLGRARRHLRGVLATEKDEILRSRTASATKRFQVKCLL*