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S16_scaffold_77_curated_13

Organism: S16_Parvibaculum_lavamentivorans_63_43_curated

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38
Location: 14123..16018

Top 3 Functional Annotations

Value Algorithm Source
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.7
  • Coverage: 631.0
  • Bit_score: 1118
  • Evalue 0.0
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HR71_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 88.7
  • Coverage: 631.0
  • Bit_score: 1118
  • Evalue 0.0
  • rbh
1-deoxy-D-xylulose-5-phosphate synthase similarity KEGG
DB: KEGG
  • Identity: 88.7
  • Coverage: 631.0
  • Bit_score: 1118
  • Evalue 0.0
  • rbh

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Taxonomy

Parvibaculum lavamentivorans → Parvibaculum → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1896
TTGCGCGCATTTCCCGAAAGCGATCTGCGTCAGTTGGCCGACGAATTGCGCGCCGAAATGATCGACGCCGTCTCGGTGACGGGCGGCCATCTCGGTGCCGGCCTCGGCGTTGTCGAGCTCACCGTCGCGCTGCATCACGTATTCAACACACCGGATGACCGCATCATCTGGGATGTCGGCCATCAAGCTTACCCACACAAGATCCTCACCGGTCGCCGCGATCGCATCCGCACGCTGCGCCAGGGCGGCGGCTTGTCGGGCTTCACCAAGCGCACCGAAAGCGAATACGACCCTTTCGGCGCCGCACATTCGTCGACATCGATTTCCGCCGGTCTCGGCATGGCGGTCGCGCGCGACCTCAATGGCGGCACCAACAATGTCGTCGCGGTCATCGGCGACGGTGCCATGTCGGCGGGCATGGCCTATGAGGCCATGAACAATGCCGGCTCGATGGACAGCCGCCTGATCATCATTCTCAACGACAACGACATGTCGATCGCCCCGCCGGTCGGCGCCATGAGTGCCTATCTGGCGCGCCTGCTTTCCGGCGGCGCCTACCGCTCGATGCGGCATCTCGCCAAGCAACTGGCGCAATTGCTGCCGAAACGGCTGGAGGAAAGCGCCCGCCGCGCCGAGGAATATGCGCGCGGCATGGCCATGGGCGGCACATTGTTCGAGGAACTCGGCTGCTATTATGTCGGGCCCATCGATGGCCACAATTTCGATCACCTGTTGCCCGTACTGAAAAACGTGCGCGATGCGGGCGAGGGGCCGATCCTCGTTCATGTCGTGACGCAAAAGGGCAAGGGCTACGCGCCCGCCGAGGCCGCCGACGACAAATATCACGGTGTCTCGAAGTTCGACGTCATCACCGGCGCGCAGGCCAAGAGCCCTGCCAATGCACCGAGCTACACCAAGGTCTTCGCCCAAAGCCTGATCGCGCATGCTGAGCGCGACGACAAGATCGTCGCCGTCACGGCGGCCATGCCCTCCGGCACCGGCCTCGACCTTTTCGGCCAGCGTTTTCCGGCGCGCACCTTCGATGTCGGCATCGCCGAGCAGCATGGCGTCACATTCGCCGCCGGCCTCGCGACCGAAGGCTTCAAGCCTTTCGCCGCCATTTATTCGACATTCCTGCAGCGCGGCTACGACCAGGTCGTGCATGACGTGGCGATCCAGCGGCTGCCGGTGCGCTTTGCCATCGACCGTGCCGGTCTCGTAGGCGCCGACGGGCCGACCCATGCCGGTGCCTTCGACGTCGCCTATCTTGCCTGCCTGCCGGGTTTCGTCGTCATGGCGGCGGCCGACGAGCTGGAATTGATGCATATGGTGGCGACGGCCGCCGCCATCGACGACCGGCCTTCCGCCTTCCGCTACCCGCGCGGCGAAGGCATAGGCCTTGATCTGCCGGAAATTGGTACACCGCTCGAGATCGGTCGGGGCCGTATTCTGCGCGAAGGCACAAAAGTGGCGATCCTGTCTTTCGGGACACGGCTTCAGGAGGCGCTGAAAGCCGCCGATCAACTCGCGGCGATGGGCCTTTCGGCGACCGTCGCCGACGCGCGCTTCGCCAAGCCGCTGGATGAGGAACTGGTGACGCGCCTGGCCCGTGAGCATGAAGTGCTGATCACGCTTGAAGAGGGCTCGATCGGCGGCTTCGGCAGCCATGTGCTCGACTTCCTGGCCCGTTCCGGTGCGCTCGACCGGGGCCTCAAGGTGCGGCCGATGGCGCTGCCCGACATTTTTATCGACCACGACAAGCCCGAAAAGATGTACGACGTGGCACACCTCAATGCGCCGCAGATCGTCGAAACGGCGCTGAAAGCATTGGGGCTTGAACGGCAAATCGCGCAAATGGCGGAAATCGCGCCGAAGCCCTTGCCGAAACTCGTCTGA
PROTEIN sequence
Length: 632
LRAFPESDLRQLADELRAEMIDAVSVTGGHLGAGLGVVELTVALHHVFNTPDDRIIWDVGHQAYPHKILTGRRDRIRTLRQGGGLSGFTKRTESEYDPFGAAHSSTSISAGLGMAVARDLNGGTNNVVAVIGDGAMSAGMAYEAMNNAGSMDSRLIIILNDNDMSIAPPVGAMSAYLARLLSGGAYRSMRHLAKQLAQLLPKRLEESARRAEEYARGMAMGGTLFEELGCYYVGPIDGHNFDHLLPVLKNVRDAGEGPILVHVVTQKGKGYAPAEAADDKYHGVSKFDVITGAQAKSPANAPSYTKVFAQSLIAHAERDDKIVAVTAAMPSGTGLDLFGQRFPARTFDVGIAEQHGVTFAAGLATEGFKPFAAIYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGADGPTHAGAFDVAYLACLPGFVVMAAADELELMHMVATAAAIDDRPSAFRYPRGEGIGLDLPEIGTPLEIGRGRILREGTKVAILSFGTRLQEALKAADQLAAMGLSATVADARFAKPLDEELVTRLAREHEVLITLEEGSIGGFGSHVLDFLARSGALDRGLKVRPMALPDIFIDHDKPEKMYDVAHLNAPQIVETALKALGLERQIAQMAEIAPKPLPKLV*