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S16_scaffold_1404_curated_1

Organism: S16_RifleBG_Stenotrophomonas_66_10_curated

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: 1..1650

Top 3 Functional Annotations

Value Algorithm Source
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 549.0
  • Bit_score: 1072
  • Evalue 0.0
ligA; NAD-dependent DNA ligase LigA (EC:6.5.1.2) similarity KEGG
DB: KEGG
  • Identity: 93.8
  • Coverage: 549.0
  • Bit_score: 1011
  • Evalue 4.80e-293
  • rbh
DNA ligase n=1 Tax=Stenotrophomonas maltophilia (strain R551-3) RepID=DNLJ_STRM5 similarity UNIREF
DB: UNIREF100
  • Identity: 93.8
  • Coverage: 549.0
  • Bit_score: 1011
  • Evalue 1.70e-292
  • rbh

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Taxonomy

Stenotrophomonas sp. RIT309 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1650
ATCGGCGAGCGTCGCGACGGCCTGGCATTCGACATTGATGGCGTGGTCTACAAGCTCGATGACCGCGCTGGCCAGCAGGCCATGGGCTTCGTGTCGCGCGCACCACGCTGGGCCATCGCGCACAAGTTCCCGGCGCAGGAACAGAGCACTACGCTGGAGGCCATCGAAATCCAGATCGGCCGCACCGGTGCCGCCACCCCGGTGGCGCGCCTTGCGCCGGTCGCGGTGGCCGGTGTGATCGTCTCCAATGCCACCCTGCACAACGCCGACCAGATCGCGCGCCTGGATGTGCGCGTGGGCGACAGCGTGATCGTGCGCCGTGCCGGCGATGTGATTCCGGAAGTGGTCAGCGTCATTCTCGACCGCCGTCCCGCCGGCACCACGCCCTGGCAGATGCCGACCAGCTGCCCGGTGTGCGGCTCGGAGATCGTGCGCGAGGAAGGGGCTGCTGCCTGGCGTTGTTCGGGCGAGCTGTCCTGCCCGGCGCAGCGCAAGGAGGCCATCGCCCACTTCGCCTCGCGACGGGCGATGGATATCGACGGCCTTGGCGACAAGTACATCGAAACCCTGGTGGACGCCGGCATCGTCAGGAGCGTGGCTGATCTGTACCGCCTCACCCGCGACCAGCTGCTGCACCTGAAGCTGGTGCTGGATGCTGAAGATCCTTCCGCGCTCGCGGCCAGCCTGAAACTGCACCTGCCGGCAGAGGGCAGTGGCGCGGTGCTCAACGCTGTGTTGAAGCTGGATGGCAACGATGCGGGGTGGCGCGCGCAGGCATTGGCGCAGCCGGCAGCCTTCGAATGGAACACCAGGAAGATCGCGACCAAGTGGGCTGACAACCTGATCGCTGCGATCGATGCCAGCCGTGATGCGACGCTGGAGCGACTGCTGTTCGCACTGGGCATCGAGCACGTCGGCGAGAGCACCGCCAAGGCACTGGCACAGTGGTTTGGCGATCTGGCGTTGATCCGCCGCCTGCCGTGGCCGTTGTTCAAGCGCGTGCCCGACATCGGTGGCGAAGTGGCGCGCTCGCTGGGCCACTTCTTCGAACAGGAGGGCAACCAACAGGCCATCGATGCGCTGCTGCAGGTGGGGCAGGTGCGCATCAGCGACGTGCACCCGCCAAGTGCAAAGCTGCGCGAGGGGCTGGACCTTCCCCAGCTGCTGGTCGAAGCGGAGATTCCCGGCATTACCCGCCTGCGCGCGGAGAAGCTGGTGGCCGCACTGCCCAGCGCGCAGGCGGTGCTGGACGCCGAGCACGGCCAGTTCGTCAACGCCGGCCTGCCCGATGACACCGCGCGCGGCGTCGCTGACTGGCTGGACAGCGAGGGCCATGGCGCGATGTTGCTGGCCGCCGAAGTGGAGATGAAGCACATCCTGGCCAGTGCGCCGGCCCTGGCCGAAGTGGTGGCCGGTCCGCTGGACGGGCAGACGGTGGTGCTTACCGGCACGCTGGCCCACCTCAATCGCGATACCGCCAAGGAGCGCCTGGAGGCGCTGGGCGCCAAGGTATCCGGCAGCGTGTCGAAGAAGACCAGTTTCGTGGTGGCCGGCACCGAGGCGGGTTCAAAGCTGGACAAGGCGCAATCGCTGGGCGTTCCGGTGTGGGATGAAGAGCGCCTGCTGGCCTACCTGGCCGAACACGAGTGA
PROTEIN sequence
Length: 550
IGERRDGLAFDIDGVVYKLDDRAGQQAMGFVSRAPRWAIAHKFPAQEQSTTLEAIEIQIGRTGAATPVARLAPVAVAGVIVSNATLHNADQIARLDVRVGDSVIVRRAGDVIPEVVSVILDRRPAGTTPWQMPTSCPVCGSEIVREEGAAAWRCSGELSCPAQRKEAIAHFASRRAMDIDGLGDKYIETLVDAGIVRSVADLYRLTRDQLLHLKLVLDAEDPSALAASLKLHLPAEGSGAVLNAVLKLDGNDAGWRAQALAQPAAFEWNTRKIATKWADNLIAAIDASRDATLERLLFALGIEHVGESTAKALAQWFGDLALIRRLPWPLFKRVPDIGGEVARSLGHFFEQEGNQQAIDALLQVGQVRISDVHPPSAKLREGLDLPQLLVEAEIPGITRLRAEKLVAALPSAQAVLDAEHGQFVNAGLPDDTARGVADWLDSEGHGAMLLAAEVEMKHILASAPALAEVVAGPLDGQTVVLTGTLAHLNRDTAKERLEALGAKVSGSVSKKTSFVVAGTEAGSKLDKAQSLGVPVWDEERLLAYLAEHE*