ggKbase home page

S16_scaffold_5194_curated_2

Organism: S16_RifleBG_Stenotrophomonas_66_10_curated

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: comp(453..1556)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.3
  • Coverage: 377.0
  • Bit_score: 692
  • Evalue 2.10e-196
23S rRNA pseudouridylate synthase C n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00036417E7 similarity UNIREF
DB: UNIREF100
  • Identity: 96.0
  • Coverage: 377.0
  • Bit_score: 684
  • Evalue 4.10e-194
  • rbh
RluA family pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 96.0
  • Coverage: 377.0
  • Bit_score: 684
  • Evalue 1.20e-194
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Stenotrophomonas sp. RIT309 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1104
ATGGCCGGGAACGCCGGTGAGCCGCTAACATGGCCGCCCCGCGGGCGGTGGTCGCGCACTGTGCCGGATTCGTCGGAAGCGGGGCTTCTGGCCCTGAGTAACTTCCAACGAAATCAATCCCTTATCTCGCCCCCCGAGTGTAACAGAATAAACAGGCTGATGACTGCACAAGACCCCACCAAGCCGGCCGGCGACAAGCCTTCCGTGCGCATGATCACCGTTCCGGCCGACCGCGCCGGCCAGCGCCTGGACAATTTCCTGCTCGGCCAGCTCAAGGGTGCCCCGCGCAGCCTGGTCTACAAGCTGGTCCGCAGCGGGCAGGTGCGCGTCAATGGCGGCCGCGCCAAGGCCGAGCGCAAGCTGGAGGCCGGCGACGAAGTGCGGATACCGCCGGTTCGTCTCAGCGAAGAGGGAGACAAGGCGGGGCCGCCCGAGGCGTTCATGCGTCGGCTGGAGCAGGCCATCGTCTTCGAAGATGCCCGGCTGCTGGCGCTGAACAAGCCGACGGGCGTCGCCAGCCATGGTGGCAGCGGCATCAGCTTCGGCGCCATCGAGACCCTGCGCGCTCTGCGCCCCGGGCAGACCCTCGAACTGGTCCACCGGCTGGACCGTGACACCTCGGGCCTGTTGATCGTGGCCAAGAAGCGTTCGGCACTGAGCGAGCTGCAGGCACTGCTGCGTGAAGACCACGGCGCCGGTATCCGCAAGCGCTACCTGACCCTGTTGGCCGGGCGCATGCCGGACGGGGTGATGACGGTCGACGCGCCGTTGCACGTGGGTCTGCGCCAGGGCGGCGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnGGCGGCCATTCCTATTGCGAGGTGCGCATCGAAACCGGCCGCACCCACCAGATCCGCGTGCACGCCCAGCATCTGGGGCATCCGGTCACCGGTGACGACAAATACGGCGATCCTGCGGTCAACAAGCGGCTTCGTGAGCAGATCGGGCTGAAGCGCCTGTTCCTGCATGCCGCGTCGCTGGAGTTCGCGCTGGACGACGGCAAGAGCCCGTATGTGCTGAACGCGCCGCTGGCCGATGAGCTGGTCGAGGCGCTGGATCGACTTCGCTAA
PROTEIN sequence
Length: 368
MAGNAGEPLTWPPRGRWSRTVPDSSEAGLLALSNFQRNQSLISPPECNRINRLMTAQDPTKPAGDKPSVRMITVPADRAGQRLDNFLLGQLKGAPRSLVYKLVRSGQVRVNGGRAKAERKLEAGDEVRIPPVRLSEEGDKAGPPEAFMRRLEQAIVFEDARLLALNKPTGVASHGGSGISFGAIETLRALRPGQTLELVHRLDRDTSGLLIVAKKRSALSELQALLREDHGAGIRKRYLTLLAGRMPDGVMTVDAPLHVGLRQGGXXXXXXXXXXXXXGGHSYCEVRIETGRTHQIRVHAQHLGHPVTGDDKYGDPAVNKRLREQIGLKRLFLHAASLEFALDDGKSPYVLNAPLADELVEALDRLR*