ggKbase home page

S16_scaffold_1473_curated_2

Organism: S16_RifleBG_Stenotrophomonas_66_10_curated

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: 996..1841

Top 3 Functional Annotations

Value Algorithm Source
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 281.0
  • Bit_score: 558
  • Evalue 3.60e-156
aroE; shikimate 5-dehydrogenase (EC:1.1.1.25) similarity KEGG
DB: KEGG
  • Identity: 91.5
  • Coverage: 281.0
  • Bit_score: 524
  • Evalue 1.50e-146
  • rbh
Shikimate dehydrogenase n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5KMG8_STEMA similarity UNIREF
DB: UNIREF100
  • Identity: 92.5
  • Coverage: 281.0
  • Bit_score: 528
  • Evalue 3.80e-147
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Stenotrophomonas sp. RIT309 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 846
ATGACCGATCGTTACGCCGTCTTCGGACACCCCGTCGCCCACTCGAAGTCGCCGCAGATCCATGCGGCGTTCGGTCGCCAGGAAGGCATCTCCCTCGACTACCGCAGCATCGATCTCGCCCCGGACGCATTCCTGGTCGGGCTGGAGGCGTTCGCCTCCGAAGGCGGTGTCGGTGCCAACGTCACTTCACCGCACAAGGAAGCGGCGTTCTCGGTGTGCACTACGCTGACCGCACGCGCGCGCCGCGCCGGCTCGGTCAATACCCTGCTGCGCAAGGGCGACCGCTGGCACGGTGACACCACCGATGGCATCGGCCTGGTGCGCGACCTCACCGACCGCCACAGCCTGGACCTGCGCGGCCGCCGCGTGCTGCTGCTGGGTGCCGGTGGTTCGGCGCGCAGCGTCGCTCCGGCGCTGCTGGATGCCGGCATCACCGAACTGGTGGTGGTCAACCGCACGCCGGAACGTGCCGATGAACTGATCGATGCCATGGGCGAGCCGGGCCGCGCGCTCAGCCGCTACTGGGACGATCTGCGCGACCTCGGTGATTTCGAACTGATCCTCAACGCCACCTCGGCCGGCCGCGATCGCGACGCCGAGTTCAAGCTGCCGCTGTCGCTGGTCAATTCGATGACCACGGCCGTCGACCTGAACTACGGCGAGGCCGCCATCGCCTTCCTGGCCTGGGCGCGCGCCGCGCAGTGCCGCAACACGGTCGATGGCCTGGGCATGCTGGTCGAGCAGGCGGCGGAGAGCTTCCTGCAGTGGCATGCCGTACGCCCGCAGACCGACGAGGTCTACCAGCAGCTGCGCGCCGGTGCCGGCGCCTTCGCCGGGCAGGACTGA
PROTEIN sequence
Length: 282
MTDRYAVFGHPVAHSKSPQIHAAFGRQEGISLDYRSIDLAPDAFLVGLEAFASEGGVGANVTSPHKEAAFSVCTTLTARARRAGSVNTLLRKGDRWHGDTTDGIGLVRDLTDRHSLDLRGRRVLLLGAGGSARSVAPALLDAGITELVVVNRTPERADELIDAMGEPGRALSRYWDDLRDLGDFELILNATSAGRDRDAEFKLPLSLVNSMTTAVDLNYGEAAIAFLAWARAAQCRNTVDGLGMLVEQAAESFLQWHAVRPQTDEVYQQLRAGAGAFAGQD*