ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

S16_scaffold_852_curated_5

Organism: S16_RifleBG_Stenotrophomonas_66_10_curated

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: comp(6518..7777)

Top 3 Functional Annotations

Value Algorithm Source
Lipid-A-disaccharide synthase {ECO:0000256|HAMAP-Rule:MF_00392, ECO:0000256|SAAS:SAAS00093200}; EC=2.4.1.182 {ECO:0000256|HAMAP-Rule:MF_00392, ECO:0000256|SAAS:SAAS00093200};; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 419.0
  • Bit_score: 824
  • Evalue 5.30e-236
lpxB; lipid-A-disaccharide synthase (EC:2.4.1.182) similarity KEGG
DB: KEGG
  • Identity: 94.3
  • Coverage: 419.0
  • Bit_score: 782
  • Evalue 4.70e-224
  • rbh
Lipid-A-disaccharide synthase n=1 Tax=Stenotrophomonas maltophilia (strain R551-3) RepID=B4SQ10_STRM5 similarity UNIREF
DB: UNIREF100
  • Identity: 94.3
  • Coverage: 419.0
  • Bit_score: 782
  • Evalue 1.70e-223
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Stenotrophomonas sp. RIT309 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1260
ATGAGCAGCGCGACCGGCCAGGCGCCGGCCGGCGCCGAGGTGATTTCGCTGGCCTCGATGGCCGGTAGCGTGCCTGCACACCGGGTGCTCAGCGAGCGCCCGTTGCGGATCGCCCTGGTCGCCGGTGAAGCCTCCGGCGACCTGCTCGGCGCAGGCCTGGTGCGCGAACTGAAGGCCCGCTTCCCGCATGCCGAATTCGCAGGCATCGGCGGCGATGCCATGCGCAGCGCCGGCTGCCAGACCTGGCACGATGCCAGCGAACTGGCGGTAATGGGCCTGACCGAAGTCCTGCGCCATCTGCCGCGGCTGCTCAAGCTGCGTTCGGCCTTCCGCCAGCGTGCGCTGGAGTGGCAACCGGATGTGTTCATCGGCATCGACGCTCCGGACTTCAATCTGGGCATCGAACGCTGGCTGAAACAGCGTGGCGTGCGCACCGTGCACTACGTCAGCCCCTCGGTGTGGGCATGGCGCGAGAAGCGTGCCGAGAAGATCGGCAGCAGCGCCGACCTGGTGCTGTGCCTGTTCCCGATGGAACCGCCGATCTACGCCAAGCACGGCATCGACGCGCGCTTCGTCGGCCATCCGATGGCCGATGACATCCCGCTGCACGTCGACCGGGAAGCGGCCCGGATCGAGCTCGGCCTGCCCGCCTCGGCCAAGGTGCTGGCCGTGCTTCCCGGCAGCCGCCTGGGCGAGATATCCAAGCTCGGCGAAGCCTTCTTCGAGGCCGCCTGGCAGGTATCCGAGCGCATTCCCGGCCTGCACGTGGTGGTGCCGGCGGCCAACGCGGCCTGCCGGCGCCTGATCGAAGAGCAGCTGTCACGCTCGGCGCTGCCGGTGGCCTATTCGCATGTACTGGACGGCCAGGCACGCAACGCGATGATCGCCGCCGACGTGGTGGTGCTGGCCTCCGGTACCGCCACCCTGGAGGCGATGCTGGTGAAGCGTCCGATGGTGGTCGGCTACCGGGTCAACGAACTGACGTACCGCCTGGTGAAGGCGCTGGGGTTGATCAAGGTCGACCGCTTCGCCCTGCCCAACATCCTGGCCGGCCAGGACCTGGCGCCAGAGCTGATGCAGCACGACTGCACGCCGGAAAAACTGGCCGCCGCCATCCAGCAGTGGTTCGACCATCCGCAGCGGATCGCCGACCTGCAGGGCACCTACGCGCGCCTGCATGAACGACTGCGCCGCAATGCATCGGCGCGGGCAGCCGATGCCGTTGGCGAGCTGCTGGTGCGCGGCCAGGAAAAGGCATGA
PROTEIN sequence
Length: 420
MSSATGQAPAGAEVISLASMAGSVPAHRVLSERPLRIALVAGEASGDLLGAGLVRELKARFPHAEFAGIGGDAMRSAGCQTWHDASELAVMGLTEVLRHLPRLLKLRSAFRQRALEWQPDVFIGIDAPDFNLGIERWLKQRGVRTVHYVSPSVWAWREKRAEKIGSSADLVLCLFPMEPPIYAKHGIDARFVGHPMADDIPLHVDREAARIELGLPASAKVLAVLPGSRLGEISKLGEAFFEAAWQVSERIPGLHVVVPAANAACRRLIEEQLSRSALPVAYSHVLDGQARNAMIAADVVVLASGTATLEAMLVKRPMVVGYRVNELTYRLVKALGLIKVDRFALPNILAGQDLAPELMQHDCTPEKLAAAIQQWFDHPQRIADLQGTYARLHERLRRNASARAADAVGELLVRGQEKA*