ggKbase home page

S16_scaffold_635_curated_6

Organism: S16_RifleBG_Stenotrophomonas_66_10_curated

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: comp(4224..5471)

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0K5C8_STEMA similarity UNIREF
DB: UNIREF100
  • Identity: 90.8
  • Coverage: 415.0
  • Bit_score: 706
  • Evalue 8.70e-201
  • rbh
Multidrug resistance protein mdtA {ECO:0000313|EMBL:EZP42975.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.3
  • Coverage: 415.0
  • Bit_score: 762
  • Evalue 1.90e-217
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 90.8
  • Coverage: 415.0
  • Bit_score: 706
  • Evalue 2.50e-201
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Stenotrophomonas sp. RIT309 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1248
ATGAACGCTTCTGCCGAGCTGTTGAAGGAACTCCGTATCGACCGCAAGTCGCCGCCGCCCGCCTCCAGTAGCGGCAGTGGTGGCCGCCGCTGGTTGTGGATCGCCGTGGCCGTGATCATCGTGCTGCTGGCCGGTGGTGCATTCGCACTGTTCGGCCGCGCGCCCACCGTGGAAGTGGACACCGCGCCGGCGGTGGCCATCCAGCAGGGCAGCGCCAGCAGTTCGGTGCTCGACGCCAGCGGCTACGTGGTCGCCCGGCGCATGGCCACGGTGTCGGCCAAGATCACCGGCAAGGTGCGCGAGGTGATGATCGAAGAAGGCATGCGGGTGGAACAGGGGCAGATCATGGCCACCCTGGACCCGATCGATGCCGACGCGCAGCGCAACCTGTACGCCTCGCAGCTGCAGGCCGCACGCAGCCAGGTGGTCGGCCTGGAAGCCCAGCAGAAGCAGGCCGCCGCTGAAGCCAGCCGCCTGCAGGCGCTGGTCGGCCAGCAGCTGGTCTCGCGTTCGCAGTATGACCAGGCCGTGGCCCAGCGTGACAGCCTGCGTGCACAGCTGGAAACCGCACGACGCAACGTCAAGGTTGCCAACGACCAGCTGTCCATCGCCGACCTTGGCGTGGACAACAACATCGTGCGCGCGCCGTTCTCCGGCGTGGTCACCGCCAAGGCCGCGCAGCCCGGCGAAATCGTCTCGCCGCTGTCGGCCGGTGGTGGCTTCACCCGTACCGGCATCGGCACCATCGTCGACATGGAATCGCTGGAGATCGAAGTCGAGGTCGGCGAAGCCTTCATCGGCCGCGTGCAGCCGAAGATGCCGGTGGAAGCCACGCTCAACGCCTACCCGGACTGGAAGATCCCGGCCGAGGTGATCGCCATCGTCCCCACCGCTGACCGCGGCAAGGCCACGGTGAAGGTACGGGTCACACTGAAGGTGAAAGATCCGCGCATCGTGCCGGAGATGGGCGTGCGGGTCAGCTTCCTGGAACAGGCCAAGCCGCAGACCGAAGCCAAGCCACAGGGCGTGCGCGTTCCGGCCACTGCGGTGGTCGAGCGTGAGGGCGCGTCGGTGGCCTTCGCACTGGGCGATGACAACCGTGTGCAGCAACGCACGGTCGAGGCGGGCCAGGCGATGGGCnnnnnnnnnnnnnnnnnnnAGGGCGTGAGCGCGGGGGAGTCGGTGGTGGTCAACCCGCTGGACACCCTGCGCGACGGCACCAGGGTCAAGCAGAAGCAAGCGCAGTAA
PROTEIN sequence
Length: 416
MNASAELLKELRIDRKSPPPASSSGSGGRRWLWIAVAVIIVLLAGGAFALFGRAPTVEVDTAPAVAIQQGSASSSVLDASGYVVARRMATVSAKITGKVREVMIEEGMRVEQGQIMATLDPIDADAQRNLYASQLQAARSQVVGLEAQQKQAAAEASRLQALVGQQLVSRSQYDQAVAQRDSLRAQLETARRNVKVANDQLSIADLGVDNNIVRAPFSGVVTAKAAQPGEIVSPLSAGGGFTRTGIGTIVDMESLEIEVEVGEAFIGRVQPKMPVEATLNAYPDWKIPAEVIAIVPTADRGKATVKVRVTLKVKDPRIVPEMGVRVSFLEQAKPQTEAKPQGVRVPATAVVEREGASVAFALGDDNRVQQRTVEAGQAMGXXXXXXXGVSAGESVVVNPLDTLRDGTRVKQKQAQ*