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S16_scaffold_3201_curated_4

Organism: S16_RifleBG_Stenotrophomonas_66_10_curated

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: comp(1704..2474)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 256.0
  • Bit_score: 523
  • Evalue 9.10e-146
truA; tRNA pseudouridine synthase A (EC:5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 95.7
  • Coverage: 256.0
  • Bit_score: 503
  • Evalue 3.30e-140
  • rbh
tRNA pseudouridine synthase A n=2 Tax=Stenotrophomonas maltophilia RepID=TRUA_STRM5 similarity UNIREF
DB: UNIREF100
  • Identity: 95.7
  • Coverage: 256.0
  • Bit_score: 503
  • Evalue 1.20e-139
  • rbh

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Taxonomy

Stenotrophomonas sp. RIT309 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 771
ATGCGTTACGCGCTCGGCGTCGAGTACGACGGCAGCGATTTCAGGGGCTGGCAGAACCTGGGCGAGGGCGGACCCAGCGTCCAGGCCAGCCTGGAACAGGCCCTGTCATCGGTGGCCGATACCCCGCTGCAGGTGGTCTGCGCCGGCCGCACCGATGCCGGCGTGCACGGCCAGTGCCAGGTCGTGCACTTCGACACCGACGTAGTACGTGATCCGCGCGCGTGGATGCTCGGCACCACCACCCGCCTGCCGCGTTCGATCGCCGTGCGCTGGTGCGTGCCGGTGGCCGACGATTTCCATGCCCGTTTCTCCGCCCGCGCACGACGTTATCGCTACCGCCTGCTCAATCGCGAAGTGCGCCCGGCGCTGGGCCGGCAGACCCTGAGCTGGGAGCGGCGCCCGCTCGATGCCGAGCGCATGCACCTGGCCGGACAGGCCCTGCTGGGCGAGAACGATTTCAGCGCCTTCCGCTCGGTCCAGTGCCAGGCCCTGCATGCCCGGCGAGAGCTGCAGTCGCTGCAGGTCAGCCGCCACGACGACGTCATCGAGGTGGCGGTGCGCGGCAATGCATTCCTTCATCACATGGTCCGCAATATCGTCGGTTCGTTGATACTGGTCGGCAGTGGCGAGCAGCCGGTGGAGTGGATCGCCGAACTGCTGGCCGGGCGCGACCGCACCGTGGCCGGTCCCACCGCTCCTCCGCAGGGACTGGTGTTCCTGGGGCCGCTGTACCCCGACAACTGGCATCTGCCCGCCGAGGTAACGCTATGA
PROTEIN sequence
Length: 257
MRYALGVEYDGSDFRGWQNLGEGGPSVQASLEQALSSVADTPLQVVCAGRTDAGVHGQCQVVHFDTDVVRDPRAWMLGTTTRLPRSIAVRWCVPVADDFHARFSARARRYRYRLLNREVRPALGRQTLSWERRPLDAERMHLAGQALLGENDFSAFRSVQCQALHARRELQSLQVSRHDDVIEVAVRGNAFLHHMVRNIVGSLILVGSGEQPVEWIAELLAGRDRTVAGPTAPPQGLVFLGPLYPDNWHLPAEVTL*