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S16_scaffold_2572_curated_4

Organism: S16_RifleBG_Stenotrophomonas_66_10_curated

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: comp(3820..4068)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Stenotrophomonas maltophilia (strain R551-3) RepID=B4SKC9_STRM5 similarity UNIREF
DB: UNIREF100
  • Identity: 71.2
  • Coverage: 73.0
  • Bit_score: 106
  • Evalue 1.00e-20
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EZP47709.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.8
  • Coverage: 82.0
  • Bit_score: 161
  • Evalue 4.90e-37
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 71.2
  • Coverage: 73.0
  • Bit_score: 106
  • Evalue 2.90e-21

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Taxonomy

Stenotrophomonas sp. RIT309 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 249
GATCCGGCCTGCGAAGGTGCCGGCCCGGCCAGACAGGCCGTTGCCGCGCAGGAACTGGCACGGCTTGTCGACGTCATCCGTGCGATGCCCTGTCGACGCCGCCAGGTCTTCATCCTGCACAAGATCCATGACGTTCCGCAGGCTGCGGTTGCCCGCCGCATGGGGATCGGCCTGAAGGCGGTCGAGCGGCATCTGCGGTTGGCGATGGTCGATTGCCGGCAGGCGCTGCCGGTGAGGGCGCTGACGTGA
PROTEIN sequence
Length: 83
DPACEGAGPARQAVAAQELARLVDVIRAMPCRRRQVFILHKIHDVPQAAVARRMGIGLKAVERHLRLAMVDCRQALPVRALT*