ggKbase home page

S16_scaffold_1982_curated_4

Organism: S16_RifleBG_Stenotrophomonas_66_10_curated

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: comp(4337..5098)

Top 3 Functional Annotations

Value Algorithm Source
RecBCD enzyme subunit RecB {ECO:0000256|HAMAP-Rule:MF_01485}; EC=3.1.11.5 {ECO:0000256|HAMAP-Rule:MF_01485};; Exonuclease V subunit RecB {ECO:0000256|HAMAP-Rule:MF_01485}; Helicase/nuclease RecBCD subunit RecB {ECO:0000256|HAMAP-Rule:MF_01485}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 253.0
  • Bit_score: 518
  • Evalue 4.90e-144
recB; exodeoxyribonuclease V subunit beta (EC:3.1.11.5) similarity KEGG
DB: KEGG
  • Identity: 86.6
  • Coverage: 253.0
  • Bit_score: 445
  • Evalue 8.20e-123
Exodeoxyribonuclease V beta chain n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KUG1_STEMA similarity UNIREF
DB: UNIREF100
  • Identity: 86.6
  • Coverage: 253.0
  • Bit_score: 445
  • Evalue 2.90e-122

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Stenotrophomonas sp. RIT309 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 762
ATGGGCAGCCGCTTCGGCAACGTGCTGCACGATGCACTGGAGAACGTCGACTTCGCACTGTGGTCGCACTGGCAGCCGCAGCAACCGGCACCGGAGGGACAGGCCGACGTTCTGCGCCGCTCGCTGCACGACGAAGGCTATGCCGACGAGGATCTGGACGATGGCGTGGCGGTGCTGGTGCCGCTGGTCGGCCACACCCTCACCGTACCGCTGCCCGAAGGCGGTGCGCTGTGCAGCGTGCCCGAGCATGAGCGCCGGGCCGAAATCGAGTTCCACTTCGCCATCGAGCCGACCGCAGTACCGGTGCTGCTGCAGCTGCTGCACGAGCACGGCATCTCCAGCGCACGGCGCGGTTTCGGCCTGCGCAGAAGGCTGGAAGGCCTGATGACCGGCAAGATCGATCTGACCTACGTGCGTGATGGCCGCTGGTATGTGCTGGACTACAAATCCAACCGGCTGCCGGGTTACAGCCCGGACCTGCTGGAGATCGCCATGCGCCACAGCGAGTACGACCTGCAGGCGCTGATCTATACCGTGGCCCTGCATCGCTGGCTGCGCTTCCGCCTGGGTGCGGCATACGACTACGCGCGCGACATGGGCGGTATCCGCTATCTGTTCTGCCGGGGCCTGGATATCGCCGGCAACGGCGTGCACGTGCAGCGCTTCGCGCCTGAGCTGGTGGATGCGCTGGATGCCTTGTTTGCGGGCGGCGAAGCAGCCCAGGCCGAGATGGCGGCGCGCGCGCGCGGAGAAACCGCATGA
PROTEIN sequence
Length: 254
MGSRFGNVLHDALENVDFALWSHWQPQQPAPEGQADVLRRSLHDEGYADEDLDDGVAVLVPLVGHTLTVPLPEGGALCSVPEHERRAEIEFHFAIEPTAVPVLLQLLHEHGISSARRGFGLRRRLEGLMTGKIDLTYVRDGRWYVLDYKSNRLPGYSPDLLEIAMRHSEYDLQALIYTVALHRWLRFRLGAAYDYARDMGGIRYLFCRGLDIAGNGVHVQRFAPELVDALDALFAGGEAAQAEMAARARGETA*