ggKbase home page

S16_scaffold_3081_curated_4

Organism: S16_RifleBG_Stenotrophomonas_66_10_curated

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: 2790..3632

Top 3 Functional Annotations

Value Algorithm Source
RND transporter n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003655FA6 similarity UNIREF
DB: UNIREF100
  • Identity: 90.6
  • Coverage: 265.0
  • Bit_score: 454
  • Evalue 5.30e-125
  • rbh
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EZP47828.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 281.0
  • Bit_score: 523
  • Evalue 1.30e-145
hemolysin secretion protein D similarity KEGG
DB: KEGG
  • Identity: 63.9
  • Coverage: 277.0
  • Bit_score: 329
  • Evalue 5.60e-88

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Stenotrophomonas sp. RIT309 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 843
ATGCGTCGCCGTTTTGTACTCCCAGCCATTTCCTGTGTTGTTCCGTTGCTCCTTGTGGCCTGCAGCAGGGCGGGTGAAAGCGACCCCCGAACCGCGCCGCCCATCGTCCGGGTCGCCCAGGTGCAGCCGGACACGGGAAACGCGCGGACCTTCACTGGCATCGTCGCCGCACGGGTGCAGAGCGATCTGGCCTTCCGGGTAGGGGGCAAGATCACCGAGCGCCTGGTCGAGACGGGGCAGACGGTCAAGCGCGGCGACGTGCTGTATCGAATTGATCCCATCGATCTGAACCTGGCCGCAGCGTCCCAGCAGCAGGCCGTCATCGCAGCACGTGCGCAGAATGTGCAAGCCACCGCGGACGAGGCGCGCTATCGCGACCTGGCGGCCAAGGGCGTTGTATCCCGGTCGGCCTACGATCAGATCAAGGCTGCCGCAGACGCGGCGTCCGCGCAGCTCAAGGCAGCCGAAGCCCAAGCCCGTGTCGCGCGCAATGCCAGTCAGTACACGGCACTTGTTGCCGATGCCGATGGGGTGGTCATGAACATTCTGGCCGAGCCCGGCCAGGTCGTTGCAGCGGGGCAGATCGTCGCCCGGCTTGCCCGTGCAGGCAGCCGCGAGGCCGTCGTCCAGCTGCCCGAGACACTTCGGCCGCAGATCGGCTCGGCGGCGTCCGCTTCCCTGTTCGGGGCAAGTGGCAGGATTCCGGCACGGTTGCGTGTGCTCTCTGAATCGGCAGATCCCGCAACCCGCACCTTTGAAGCCCGCTACACCCTGGAGGACGGCAGCACGGCATTGCCGTTGGGGTCCACCGTGGCGGTAGCGGTTGAAGGCACCGCAGCTGCA
PROTEIN sequence
Length: 281
MRRRFVLPAISCVVPLLLVACSRAGESDPRTAPPIVRVAQVQPDTGNARTFTGIVAARVQSDLAFRVGGKITERLVETGQTVKRGDVLYRIDPIDLNLAAASQQQAVIAARAQNVQATADEARYRDLAAKGVVSRSAYDQIKAAADAASAQLKAAEAQARVARNASQYTALVADADGVVMNILAEPGQVVAAGQIVARLARAGSREAVVQLPETLRPQIGSAASASLFGASGRIPARLRVLSESADPATRTFEARYTLEDGSTALPLGSTVAVAVEGTAAA