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S16_scaffold_520_curated_8

Organism: S16_RifleBG_Stenotrophomonas_66_10_curated

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: comp(7981..8604)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=2 Tax=Stenotrophomonas maltophilia RepID=B4SIS4_STRM5 similarity UNIREF
DB: UNIREF100
  • Identity: 88.3
  • Coverage: 206.0
  • Bit_score: 353
  • Evalue 1.20e-94
  • rbh
RNA polymerase sigma factor sigW {ECO:0000313|EMBL:EZP47750.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 207.0
  • Bit_score: 406
  • Evalue 1.70e-110
RNA polymerase sigma factor RpoE similarity KEGG
DB: KEGG
  • Identity: 88.3
  • Coverage: 206.0
  • Bit_score: 353
  • Evalue 3.50e-95
  • rbh

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Taxonomy

Stenotrophomonas sp. RIT309 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 624
ATGTACCGTCCTCCCGCCAGTCCCTCCCATCCCTTCGACACCGCGCGGATCGTGTCCAGTTCACAGCAGCCCAGCAACGAGCCAACGAACTGGAACGGCGAGATGGATGGCGTCGCCCGGCTGCGCGATCGTGACTGCTTCATGCGCATCTACGACCATTTCATGCCGCGCCTGTGCATTTATCTGCGTGGCCTTGGGGCACCCGCAGCGGTGGCCGAAGAGCTGGCCCAGGAATGCCTGCTGCGCCTGTGGCTGCGCGCGGCCGAGTTCGATCCTGCCCAAGGTGCGCTGAGCACCTGGTTGTATCGCATCGGTCGCAACCTGCACATCGACCGCGTGCGTCGCGAACGCAGCTGGATGCAGGTGCAGGAAGCCGnnnnnnnnnnnnnnnnnnCCGACGTCGGCGAGCGCAGCAGCGCCGAGCAGTTTGCCGACCATGCCCGCCTGCGCCAGCGCATCAATGAACTGCCGGCCACGCAGGCGCGTCTGGTTCGCATGTCCTACTTCGAGGCCAAGAGCCACAGCGAGATCGCGCAGGCGCTTGGGATGCCGCTGGGCACGGTCAAATCACACCTGCGACGAGCGTTCCTGCAGTTGCAGTCGAAGGTCGGGGGTGCACCATGA
PROTEIN sequence
Length: 208
MYRPPASPSHPFDTARIVSSSQQPSNEPTNWNGEMDGVARLRDRDCFMRIYDHFMPRLCIYLRGLGAPAAVAEELAQECLLRLWLRAAEFDPAQGALSTWLYRIGRNLHIDRVRRERSWMQVQEAXXXXXXXDVGERSSAEQFADHARLRQRINELPATQARLVRMSYFEAKSHSEIAQALGMPLGTVKSHLRRAFLQLQSKVGGAP*