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S16_scaffold_1591_curated_6

Organism: S16_RifleBG_Stenotrophomonas_66_10_curated

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: 5059..6288

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=1 Tax=Xanthomonadaceae RepID=UPI00029A80C1 similarity UNIREF
DB: UNIREF100
  • Identity: 94.2
  • Coverage: 411.0
  • Bit_score: 753
  • Evalue 1.00e-214
  • rbh
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 410.0
  • Bit_score: 794
  • Evalue 5.80e-227
rpoD; RNA polymerase sigma factor RpoD similarity KEGG
DB: KEGG
  • Identity: 93.7
  • Coverage: 411.0
  • Bit_score: 750
  • Evalue 1.90e-214
  • rbh

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Taxonomy

Stenotrophomonas sp. RIT309 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1230
ATGGCCAACGAACGTCCTGCCCAATCCGAAATCAAGCAACTGATCAGCAAGGGCCTGGAACAGGGCTACCTGACCTATGCCGAAGTCAATGACCATCTGCCCGACGACATGGTCGACCCGGAACAGATCGAAGACATCATCGGCATGATCAACGGCATGGGCATTGATGTCCATGAAGTTGCTCCGGATGTGGAAACCCTGCTTCTCAACGACGGCAACACGGGCAACCGTGAGGTCGACGACACCGCAGCCGAAGAAGCTGCCGCCGCGCTGAGCGCGCTCGACACCGAAGGTGGCCGTACCACCGACCCGGTGCGCATGTACATGCGCGAAATGGGTACCGTCGAGCTGCTGACCCGCGAAGGCGAAATCGCCATTGCCAAGCGCATCGAAGAAGGCCTGTCCCAGGTCCAGGCCGCACTCGGCCAGTTCCCGGTGTCGGTCGAATCGCTGCTGACCGATTACGAAGCGCACAAGGAAGGCCGCAAGCGCCTTGCCGAAGTGATCGTCGGCTTCAACGACCTGACCGACGACGTGCCGGCCCCGGCCGCTGTGGTGGCCGATGACGCGGACGACGCCGATGCCGACGCCGACGAGGAAGAAGACGACGTCGACGGCGGCGATGAAGAAGCCGCACCGACCGGTCCGGATCCGGAGGAAGTGGCTGCGCGCATGCAGGCGCTGGGCGATGCCCTCAACGCCTTCAAGAAGGCTGCCGCCAAGGGCGACAAGAAGAACCTGCTGAAGCTCCGCGAGGAGATGTCGGCGGTGTTCGTCACCCTGAAGCTGCCGCTGCCGCTGACCGACGTGCTGACCAAGCAGCTGCGCGACACCATGGGCAGCATCAAGGCCCACGAGCGCCGCGTGCTGAACCTGGCCACCGTCACTGCCCGCATGCCGCGCAAGGACTTCATCCGTTCCTGGGAAGGCAACCAGACCAACCTGGAGTGGGTGGAAGACGCACTGAAGCGCAAGCAGAAGTGGTCTTCGGCGCTGCGTGAAGTGAAGGACCAGATCGTGTCCGAGCAGCAGGCCACCATCGACATCGAGAAGGTCACCCTGCTGGACTTGGACGAGCTGAAGGAACTCAGCCGTGCCATGGCCTACGGCGAAGCCAAGGCGCGCAAGGCCAAGAAGGAAATGGTCGAGGCCAACCTGCGCCTGGTGATCTCCATCGCCAAGAAGTACACCAACCGCGGCCTGCAGTTCCTCGACCTGATCCAGGAAGGC
PROTEIN sequence
Length: 410
MANERPAQSEIKQLISKGLEQGYLTYAEVNDHLPDDMVDPEQIEDIIGMINGMGIDVHEVAPDVETLLLNDGNTGNREVDDTAAEEAAAALSALDTEGGRTTDPVRMYMREMGTVELLTREGEIAIAKRIEEGLSQVQAALGQFPVSVESLLTDYEAHKEGRKRLAEVIVGFNDLTDDVPAPAAVVADDADDADADADEEEDDVDGGDEEAAPTGPDPEEVAARMQALGDALNAFKKAAAKGDKKNLLKLREEMSAVFVTLKLPLPLTDVLTKQLRDTMGSIKAHERRVLNLATVTARMPRKDFIRSWEGNQTNLEWVEDALKRKQKWSSALREVKDQIVSEQQATIDIEKVTLLDLDELKELSRAMAYGEAKARKAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEG