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S16_scaffold_2202_curated_3

Organism: S16_RifleBG_Stenotrophomonas_66_10_curated

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: comp(1654..2685)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; EC=5.4.99.27 {ECO:0000256|HAMAP-Rule:MF_01082};; tRNA pseudouridine(13) synthase {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA pseudouridylate synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA-uridine isomerase D {ECO:0000256|HAMAP-Rule:MF_01082}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 343.0
  • Bit_score: 679
  • Evalue 1.30e-192
truD; tRNA pseudouridine 13 synthase (EC:4.2.1.-) similarity KEGG
DB: KEGG
  • Identity: 95.3
  • Coverage: 343.0
  • Bit_score: 655
  • Evalue 7.10e-186
  • rbh
tRNA pseudouridine synthase D n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KMC1_STEMA similarity UNIREF
DB: UNIREF100
  • Identity: 95.3
  • Coverage: 343.0
  • Bit_score: 655
  • Evalue 2.50e-185
  • rbh

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Taxonomy

Stenotrophomonas sp. RIT309 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1032
ATGATCCCGTTGCCGCTCGCGTTCGGTGCACCGCTGCTGCAGGCGCGCATCCGCACCACGCCGGAAGATTTCCAGGTCGATGAGCTGCCCGCTTTCGAAGCGACCGGTGAAGGCGAGCATCTGTTGCTGCATATCCGCAAGCGTGGCGCCAATACGGTGCACGTGGCCAAGGTACTGGCCAAGTGGGCAGGCCTGCCGGAAATGGCGGTCAGCTATGCCGGCATGAAGGACCGCAACGCGGTCACCACCCAGCGTTTCAGCGTACATCTGCCCAAGCGCGTCGCGCCCGATCTGGCCGAGCTGGCCAGTGACGAGATCGAGGTGATCGACTCCACCTGGCACAACCGCAAGCTGCAGCGCGGTGCGTTGGCGGGCAACCGCTTCAGGCTGGTGCTGCGCGATGTGCAGGGTGACGCGGCGGCAATCGACGAGCGCCTGCAGCAGATCGCCGCGCGTGGCCTGCCGAACTGGTTCGGCGAGCAGCGCTTCGGTCGCGATGGCGGCAACGTTCCCGCTGCGTTGGCGATGTTCGGTGGCCGGCGCATGCGCAAGGACCAGCGTTCGCTGCTGTTGTCGGCGGCGCGTTCGGCCTTGTTCAACCGCGTGCTCGCTGCACGCGTGGAGCAGGGCAGCTGGGACCAGCCGCTGCAGGGCGAAGTGTGGATGCTTGATGGCAGCCGCAGCGTGTTCGGCCCCGAGCCCTACAGCGACGTGCTGGCCGAGCGCCTGGCACGTTTCGACATCCACCCCAGTGCTCCGTTGTGGGGTGAGGGTGAGCTGCGCAGCAGCGACGCCGCCCGTGAGCTGGAACTGGCAGCGCTGGATGATGACGAATCAAAGGCGCTGCGCGCCGGCCTGGAAGAGGCGCGGCTGAAGCAGGAGCGGCGCGCGCTGCGGCTGCGTCCAGCGCTGCTGCAGCACCAGTGGCTGGCCGCTGACGTACTGGAGTTGTCCTTTGCGCTGCCGCCAGGCTGCTATGCCACCGCGGTCCTGCACGAGCTCGGCCCGGTCGAGGACGCGTCGCAGGCCTGA
PROTEIN sequence
Length: 344
MIPLPLAFGAPLLQARIRTTPEDFQVDELPAFEATGEGEHLLLHIRKRGANTVHVAKVLAKWAGLPEMAVSYAGMKDRNAVTTQRFSVHLPKRVAPDLAELASDEIEVIDSTWHNRKLQRGALAGNRFRLVLRDVQGDAAAIDERLQQIAARGLPNWFGEQRFGRDGGNVPAALAMFGGRRMRKDQRSLLLSAARSALFNRVLAARVEQGSWDQPLQGEVWMLDGSRSVFGPEPYSDVLAERLARFDIHPSAPLWGEGELRSSDAARELELAALDDDESKALRAGLEEARLKQERRALRLRPALLQHQWLAADVLELSFALPPGCYATAVLHELGPVEDASQA*