ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

S16_scaffold_345_curated_17

Organism: S16_RifleBG_Stenotrophomonas_66_10_curated

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: 12951..13253

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=2 Tax=Stenotrophomonas maltophilia RepID=J7URR4_STEMA similarity UNIREF
DB: UNIREF100
  • Identity: 90.0
  • Coverage: 100.0
  • Bit_score: 176
  • Evalue 1.30e-41
Putative transcriptional regulator {ECO:0000313|EMBL:EZP46995.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 98.0
  • Bit_score: 188
  • Evalue 2.70e-45
HTH family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 89.0
  • Coverage: 100.0
  • Bit_score: 175
  • Evalue 6.20e-42

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Stenotrophomonas sp. RIT309 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 303
ATGGCAGCTAAGAAGAAGATTCAGCTGGAGACGTTCGACGTCGCCGAACACCTGCGCACCCCCAAGGAAATGGCCGCGTATCTGGACGCGTGCATTGCCGAAAGCGACGGCGACTCTGCATTCATCGCCAAGGCGCTCGGCGATATTGCCCGCGCCCAGGGCATGAGCAAGGTTGCCCGCGATGCGGGTGTGTCGCGCGAAAGCCTGTACCGCGCCCTGTCCGGCGAGCGCAGCCCGGACTTCGCCACCATCCTCAAGGTGACGCGTGCCCTCGGCGTGCAGCTGCACGCGAGCGCTGCCTGA
PROTEIN sequence
Length: 101
MAAKKKIQLETFDVAEHLRTPKEMAAYLDACIAESDGDSAFIAKALGDIARAQGMSKVARDAGVSRESLYRALSGERSPDFATILKVTRALGVQLHASAA*