ggKbase home page

S16_scaffold_1039_curated_4

Organism: S16_RifleBG_Stenotrophomonas_66_10_curated

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: 3636..4142

Top 3 Functional Annotations

Value Algorithm Source
Alpha-fimbriae major subunit n=1 Tax=Pseudomonas geniculata RepID=UPI00029A9182 similarity UNIREF
DB: UNIREF100
  • Identity: 90.5
  • Coverage: 168.0
  • Bit_score: 300
  • Evalue 1.00e-78
  • rbh
Giant cable pilus fimbrial subunit {ECO:0000313|EMBL:EZP44263.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 168.0
  • Bit_score: 324
  • Evalue 5.30e-86
CS1 type fimbrial major subunit similarity KEGG
DB: KEGG
  • Identity: 53.5
  • Coverage: 170.0
  • Bit_score: 171
  • Evalue 1.20e-40

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Stenotrophomonas sp. RIT309 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 507
ATGAACTCCATCCTGAAGAAGGCCGCGCTCGCTGCAGCGCTGGCTACCGTTTCGCTGTCCGCCAATGCATTCGATGCCGACATCAAGGTCTGGGCCAACGTCGATCCGACCCTGGCCCTGCTCAAGGCCGATGGCACTGCGCTGGATTCGGTGGTCAACATGGTCCACAACCCGGTCAGCGGCCTGGTGCCCTGGTCGCAGCAGGTGCGCATCTACTCCAACGATGAAAGCAAGGACATCGAAGTGCGTGTTGGCAGCACACCGCAGCTGCTCAACACCGATGGTGGCGGCGCGCCGGTGCCGCTGACCGTCAGCCTCAATGGCAGGGCGCTGACCGTGGCGGCGCAGGACTTCTCCGCAACCGACCTGTTCGACGGCGCACTGCCGGGCGCATCGATCCCGCTGGCGCTGCGTATTGCACAGACCGTCCAGGCGCCGATCGCCCGCGGCGGCAGCTACGAAGGCATCGTCACCATCGCCATGCAGCAGAAGACCACCAGCCCGTAA
PROTEIN sequence
Length: 169
MNSILKKAALAAALATVSLSANAFDADIKVWANVDPTLALLKADGTALDSVVNMVHNPVSGLVPWSQQVRIYSNDESKDIEVRVGSTPQLLNTDGGGAPVPLTVSLNGRALTVAAQDFSATDLFDGALPGASIPLALRIAQTVQAPIARGGSYEGIVTIAMQQKTTSP*