ggKbase home page

S16_scaffold_3086_curated_4

Organism: S16_RifleBG_Stenotrophomonas_66_10_curated

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: 1833..3293

Top 3 Functional Annotations

Value Algorithm Source
NodT protein n=1 Tax=Stenotrophomonas maltophilia RA8 RepID=M5D9E0_STEMA similarity UNIREF
DB: UNIREF100
  • Identity: 95.1
  • Coverage: 486.0
  • Bit_score: 904
  • Evalue 3.30e-260
  • rbh
Outer membrane efflux protein {ECO:0000313|EMBL:EZP42708.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 486.0
  • Bit_score: 939
  • Evalue 1.70e-270
tripartite multidrug resistance system outer membrane protein similarity KEGG
DB: KEGG
  • Identity: 94.9
  • Coverage: 486.0
  • Bit_score: 900
  • Evalue 1.80e-259
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Stenotrophomonas sp. RIT309 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1461
GTGAACGCCGCCCTGCCCCGCCTTGGCCTGATCGTCGCGCTGGCCAGCCTGGCTGCGTGCAGAACCGTCGGCCCGGATTACGCATTGCCCGAGGGCTCGGCGTTCAAGCGGCCGCAGGCGAATGCCGCGTTCATCGATACCCACAACCCCGAAGTGGCTGCCAACCAGGCACTGCCGGCACGCTGGTGGTCGCTGTACAACGACCCGGTGCTGGATGGGCTGATCACCCAGGCGCTGCGCGACAACGTCGAACTGAAGGCTGCCGACGCGCATCTGCGCCGCGCTGCTGCGGTGTACGAGCAGGCGATGGACGCCGGTGGCTTCGAGTACGAGGCCGAAGCCGGCGTCAGCCGCGCACAGTTGTCGGCCGAGTCGTTCCTGCAGGAGCACGAGCTGCCGGTGATCAACCTGGCCGACGGCAAGTTCGCGGTGAGCTACCAGTTCGACCTGTTCGGCAAGCTCAAGCGCGGTGCCGAAGCAGCCCGCGCCGACGAACAGTCGGTGGCCGCTGCACGTGACCTGGCCCAGGTGAGCGTGGTGGCCGAGGTGGCCGACAGCTACCTGGAGATCTGCCACGCCAACCATGAGCTGCATGTCGCCGAGCATTCCCTGCAGCTGCAGCAGCGCAGCCGTTCGGTCACCCAGCGGTTGATCAGCGCAGGCCGCGGCACGCCGCCGGAACTGGCGCGCGCCAATGCCCAGGTCGCGCTGCTGGAAGCCGCATTGCCCCCGCTGCAGGCGCAGCGTTCGGCCGCCGCCTATTCGCTGGCGGCACTGCTTGGGCAGACCCCGGGCCAGCTGCCGGCCGGGGTGATCGACTGCGCGCACGCACCCACCCTTGCCCAGCCGCTGCCGGTCGGTGATGGCCGCGCGCTGCTGCAGCGCCGTCCCGACATCCGCCAGGCCGAACGCAAGCTGGCCTCGGCCACCGCACGGATTGGTGTCGCCACTGCCGAGCTGTACCCGGACATCCGCCTGGGCGCCTCGGTCGGCGCCGCCGGCCTGCTGGAAGACTTCGGCCAGCCGATGACCCAGCAGTGGTCGTTCGGCCCGCTGATCTCGTGGACGCTGCCGTCCTCGGGCACGCATGCACGCATCCACGCCGCCGAGGCTGGCGCCGATGCGGCGCTGGCCGAGTTCGACCATGCCGTGCTGCAGGCACTGCGCGAAACACAGACCGCACTGGACCGCTATGCGCAGGATCTGCGCCGCCTGCAGTCGTTGCGCGTGGCGCAGGAGCAGGCTGCGATGGCCGCAGAGCAGAACCGCCGGCTGTACCAGGGTGGCCGCACGCCGTACCTGTCCAGCCTGGATGCCGACCGCAGCCTGGCCAGCAGCGATGCCACCCTGGCCGCGGCCGAAGCCCAGGTCTCGCGCGACCAGATCCATCTGTTCCTGGTACTGGGCGGTGGCTGGCAGGACAGTGCCGCGTCTGCGTCTGCGCCGACGGCGGCGAGGTAA
PROTEIN sequence
Length: 487
VNAALPRLGLIVALASLAACRTVGPDYALPEGSAFKRPQANAAFIDTHNPEVAANQALPARWWSLYNDPVLDGLITQALRDNVELKAADAHLRRAAAVYEQAMDAGGFEYEAEAGVSRAQLSAESFLQEHELPVINLADGKFAVSYQFDLFGKLKRGAEAARADEQSVAAARDLAQVSVVAEVADSYLEICHANHELHVAEHSLQLQQRSRSVTQRLISAGRGTPPELARANAQVALLEAALPPLQAQRSAAAYSLAALLGQTPGQLPAGVIDCAHAPTLAQPLPVGDGRALLQRRPDIRQAERKLASATARIGVATAELYPDIRLGASVGAAGLLEDFGQPMTQQWSFGPLISWTLPSSGTHARIHAAEAGADAALAEFDHAVLQALRETQTALDRYAQDLRRLQSLRVAQEQAAMAAEQNRRLYQGGRTPYLSSLDADRSLASSDATLAAAEAQVSRDQIHLFLVLGGGWQDSAASASAPTAAR*