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S18_scaffold_37_curated_4

Organism: S18_Pseudomonas_mendocina_63_22_curated

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 14 / 38
Location: 3070..3789

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.0
  • Coverage: 239.0
  • Bit_score: 459
  • Evalue 2.60e-126
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DZS4_PSEMN similarity UNIREF
DB: UNIREF100
  • Identity: 95.0
  • Coverage: 239.0
  • Bit_score: 459
  • Evalue 1.80e-126
  • rbh
16S ribosomal RNA methyltransferase RsmE similarity KEGG
DB: KEGG
  • Identity: 95.0
  • Coverage: 239.0
  • Bit_score: 459
  • Evalue 5.20e-127
  • rbh

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Taxonomy

Pseudomonas mendocina → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 720
ATGCGCCTATCCCGCTTCTTTATCGATGCCCCGCTGTCCCTCGGCCAGCATGAACTGCCCGAGGCCCAGGCCCACTACATCGGCCGCGTGCTGCGCCATGCGGCGGGCGATGCCGTGCAGCTGTTCGACGGCAGCGGCCAGGAATACCTCGGCGAACTGATCGAAGTGGGCAAGAAGAGCGTGCGCGTCGAACTGCGCGAAGCCATCGCCGGGCTAAGCGAATCGCCGCTGCGCATCCATCTGGGCCAGGGCCTGTCGCGCGGCGAGCGCATGGATTGGGCGATTCAGAAAGCCACCGAGCTCGGAGCCAGCGAAATCACCCCGATCGTCTCCGCGCGCTGCGAGGTGCGCCTGAAGGACGAACGCGCCGACAAGCGCATGGCCCATTGGCGTCAGGTGGCGATCAGCGCCTGCGAGCAATGCGGCCGTTCGGTGCTGCCGGTGATCCACGCGCCGCTGGAACTGAACGCATGGCTGCAGCAGATCGAAGCCGACCTGAAACTGGTATTGCACCCGGTCGCCGAACCCTGGGCCGGCCATGTCCCGCCGCGCTCACTGGCGTTTTTGATCGGCCCCGAAGGCGGTTTGAGCGATGCAGAGGTGGATCAGGCCAGGCAGTCTGGCTTCCATGCCGCCCGCCTTGGACCGCGCGTTTTGCGCACCGAAACGGCTCCAGTGGTCGCTTTGAGTGTCGCTCAGCAGCTCTGGGGAGACCTGTAG
PROTEIN sequence
Length: 240
MRLSRFFIDAPLSLGQHELPEAQAHYIGRVLRHAAGDAVQLFDGSGQEYLGELIEVGKKSVRVELREAIAGLSESPLRIHLGQGLSRGERMDWAIQKATELGASEITPIVSARCEVRLKDERADKRMAHWRQVAISACEQCGRSVLPVIHAPLELNAWLQQIEADLKLVLHPVAEPWAGHVPPRSLAFLIGPEGGLSDAEVDQARQSGFHAARLGPRVLRTETAPVVALSVAQQLWGDL*