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S18_scaffold_786_curated_5

Organism: S18_Pseudomonas_mendocina_63_22_curated

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 14 / 38
Location: comp(2438..3433)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Pseudomonas fluorescens Q2-87 RepID=J2Y4T8_PSEFL similarity UNIREF
DB: UNIREF100
  • Identity: 82.6
  • Coverage: 333.0
  • Bit_score: 532
  • Evalue 2.40e-148
  • rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EJL02166.1}; TaxID=1038922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens Q2-87.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.6
  • Coverage: 333.0
  • Bit_score: 532
  • Evalue 3.30e-148
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 84.6
  • Coverage: 319.0
  • Bit_score: 522
  • Evalue 5.30e-146
  • rbh

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Taxonomy

Pseudomonas fluorescens → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 996
GTGAGTTCGTCATCTAGAAATGCTTCATCGAGCCCGAGCGTAGCTGCTGGAAAATGGGATGCGGGCGAAGCGGTAAGCCAGCTCTCCTGGGACGATCTGCGCATCATCAAGACGCTGAGCGAGTGCGGCAATCGCGCCGCCACGGCGAAGAAGCTCGGCATCAACGTCTCGACCGTGTCGCGCCGCCTGGCGCAGGTCGAGAAGACGCTCGGTGTCGCGATGTTCGACCATCGTCGCTCCGGCTACATGCTCACTGCCGAGGGCGAGGAACTGCGCGCCCTCGGCGAGCGGGTCGAACTGGATATCGTCAGCGTCACGCGGCGCGTGTCGCGAGCGGGGCAGGGGCCGCAGGGCAAGCTGCGCATCACCACCAGTGACTCGTTGCTGCTGCACTTTCTCACGCCGATCATCGCCGACTTCAAGGTCGTCAACGAAGGCATCGCCGTCGAGGTGCTGGTGGGCAACCAGACCCTGAGCCTGGCCCGGGACGAATCGGATATCGCCGTGCGCGCGACGAGAAAACCGGGGGAAAGCCTGGTCGGGCGCAAGCTTGCGACCATCGCCTGGGCGTCGTACGGACGCGCTGGGCATGCGTCGAGTGCTGACCCCTTCGATGGCCAGGCCTGGGTGTCATACTCCGGTGCCTTGTCCGGCCTCAGGGCGGCGAGCTATCTGGAATGTCGGGTGGCGGCGGAATGCATTTCCTACCGCACCGATTCGGTCGCGGCGGCGAGCGCGGCCATCGCCGCGGGGCTTGGCTTCGGCTTTCTACCCTGCATGCTGGGCGATATAACGCCCGGGCTGGTACGCGTCGGGCCTGTGGTGCCCGAGCTCCATGACGAGCTATGGCTGCTTACCCACCAGGACATTCGCAAGTCGTGGCGGGTCAAGGCGTTCATGGCGTTCTGCGCCGCTGCCGTGGCCGAGCAGAAGGCGCTGATCGAAGGACAGCGGGCTCTCCCGGTTGCGTTGGACGAAACCGGGAGCGCGACTTAG
PROTEIN sequence
Length: 332
VSSSSRNASSSPSVAAGKWDAGEAVSQLSWDDLRIIKTLSECGNRAATAKKLGINVSTVSRRLAQVEKTLGVAMFDHRRSGYMLTAEGEELRALGERVELDIVSVTRRVSRAGQGPQGKLRITTSDSLLLHFLTPIIADFKVVNEGIAVEVLVGNQTLSLARDESDIAVRATRKPGESLVGRKLATIAWASYGRAGHASSADPFDGQAWVSYSGALSGLRAASYLECRVAAECISYRTDSVAAASAAIAAGLGFGFLPCMLGDITPGLVRVGPVVPELHDELWLLTHQDIRKSWRVKAFMAFCAAAVAEQKALIEGQRALPVALDETGSAT*