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S18_scaffold_2054_curated_5

Organism: S18_RifleGW_Spirochatetes_52_9_curated

partial RP 34 / 55 BSCG 36 / 51 ASCG 8 / 38
Location: comp(4481..5008)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily id=4689191 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta coccoides genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes similarity UNIREF
DB: UNIREF100
  • Identity: 88.6
  • Coverage: 175.0
  • Bit_score: 307
  • Evalue 6.50e-81
  • rbh
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 60.3
  • Coverage: 174.0
  • Bit_score: 228
  • Evalue 1.40e-57
Tax=BJP_08E140C01_Spirochaeta_53_29 similarity UNIPROT
DB: UniProtKB
  • Identity: 88.6
  • Coverage: 175.0
  • Bit_score: 307
  • Evalue 9.10e-81

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Taxonomy

BJP_08E140C01_Spirochaeta_53_29 → Spirochaeta → Spirochaetales → Spirochaetia → Spirochatetes → Bacteria

Sequences

DNA sequence
Length: 528
ATGGAAATAAACAGTAGCGACAATGAATCTTTCCGGCTTGTATATGCAGAGGTATTTCCTATAGTGATGAGGGTCGCGTACCATGTCACGTACAATATGGATGTATCCGAGGATATCTGTCAGGAGGCGTTCATTAGGTTTTACGAGAAGAACATTAGCTTCCGTTCTGTCGACGAGGCGAAATATTGGTTGATACGAGTGACTAAAAATCTATCGATCAACGTGATAAAGCGTAAGTCGAGGGAACAGGCGGTTGTTGAGAAGATCAAGAAGACACCTTCCGTGACAGTCAAAAACGGGGAGGAGGCCTTGATCAACGAAGAAACCCGCCTCTTGGTTAGGGATGCAGTGGAAAAACTTCCCGAAAAACTGAAGTCGGTGCTGGTGTTGAAGGAATATGCGGATCTGAATTATAAGCAGATCGCGGAGATCCTCCATATTTCCGAAAGCAATGTGAAGGTTAGGGTGCATCGTGCAAGAAAAATCATGGAATCGATGCTGGACCGGGAGGAAATGCATGTGTCTTGA
PROTEIN sequence
Length: 176
MEINSSDNESFRLVYAEVFPIVMRVAYHVTYNMDVSEDICQEAFIRFYEKNISFRSVDEAKYWLIRVTKNLSINVIKRKSREQAVVEKIKKTPSVTVKNGEEALINEETRLLVRDAVEKLPEKLKSVLVLKEYADLNYKQIAEILHISESNVKVRVHRARKIMESMLDREEMHVS*