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S20_scaffold_323_curated_8

Organism: S20_RifleGW_Geobacter_56_21_curated

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: 6605..8104

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide biosynthesis n=1 Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1AT07_PELPD similarity UNIREF
DB: UNIREF100
  • Identity: 51.7
  • Coverage: 478.0
  • Bit_score: 489
  • Evalue 2.60e-135
lipopolysaccharide biosynthesis protein similarity KEGG
DB: KEGG
  • Identity: 51.7
  • Coverage: 478.0
  • Bit_score: 489
  • Evalue 7.50e-136
Lipopolysaccharide biosynthesis {ECO:0000313|EMBL:ABL00478.1}; Flags: Precursor;; TaxID=338966 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter.;" source="Pelobacter propionicus (strain DSM 2379).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.7
  • Coverage: 478.0
  • Bit_score: 489
  • Evalue 3.70e-135

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Taxonomy

Pelobacter propionicus → Pelobacter → Desulfuromonadales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1500
ATGAAGCGACACGAACCAATTCCCTATGAGCAGGACACCTACCTTCTGCCGGAAGGTGACCGGAAGAGCTATCGCCTGAAGGAGTTCGTCGCCATTCTGTTCAAGCATAAGCGTCGCATCGCGGCAATCTTCTTTGCCGTGGTTTTCTTGGTGGCGTTGATTTCCCTGATGCGGACACCCGTGTATGAAGCGCGATCGGGGCTCCTGATAAAGATAGGGCGTGAATTCCTCAATTCATCGGAACTGGGGGCGGAAAGCAGGCCGGTGCTCGCGGTCAACCAGGAAGAGGTGACCAATTCGGAGATCCAGATCCTCACTAACCGCAACCTTATCAAGCAGGTAATCGCGGCCGTGTCGCTGAACAAGATGTATCCGGAACTGGCAAAGGATCCGCCGAAGGGCCGGGACCCGATGGAAGAGGCGGCCTTCATGTTCGAGAAGAAGCTGCGCGTCGAGGCGGTCAAGAAGTCGAACGTAGTCTGGGTGTCGTTCCGGCACGAAGACCCGCAGATTGCCGCCCAGGCGGTGAACACCCTGATCGACCTTTTCAAGGAGAAACACCTGGAGGCGTACAGCACTCCCCGCTCCTCTTTTCTCGAACAGCAGCTTCAAACCTACGAAGCCAAGCTGAAAGATTCGGAAACAAAGCTGCAGTCATTCAAACAGCAGAAGGCGGTATACCAGATCGAGGAGCAGCGGACGATGCTCCTGCAGCAGCGTTCGGACCTGGACACGGTCATGAAGGTGTCGGAGCATTCCATCCAGGAGTTGCAGAAACGGGTTGCCCATCTTAAGAACCAGGCGAAATCCATGGAGAACAACGGCATCAGGTACACCGCCAGCGACCGGGATAATATAATCATCGAGGCGAACAACCGGCTGCTGAACCTGAAACTGACGGAACAGGAACTGTCGAAGAAATACAAATCTGACAGCTACCTTGTGCAGAATGCCCGGGAAGAACGGCAACTGGTCGAGGAATTCATCAAAAAACAGGAGACGGATACCCACGCAAAGGTAAAAACCAGCAACCCGGTGTTCCAGAACGTGGAAATGGAGCTTGTCCGGGCGGAGACCGAACTCAGTTCACAGAAGGGGAAACTGGCGGCATTGAGACAGCAGGTGAAGAAGCTCGATTCCGACATAAAATCGCTCGATTCTCACGATCAGCAGCTCCAGGAACTGAAACGGGCACAGATGATACATGCCAAGAACTATGAGACCTATGCCGGCAAAGCAGAGGAAGCAAGAATCTCCGAAGACATGAACCGGATGAAGCTTGCAAACATCAGCGTCATTCAGGAAGCGACAGCTCCCGACCGCCCGCTCAAAAGAAACCGCCTCCTCCACATGATCCTGGCCACCATCGCGGGGGGTGCCCTCGGTGTCGGCTTCGCCTTTTTCTCCGAGGTTACACGTCAAACCTTCTCGTCGCCGAAGGAAGTCGAGCGGCGCCTGGGATTGCCGGTCCTGGCCTGCATTCCCCACGAAGAGCCGTGA
PROTEIN sequence
Length: 500
MKRHEPIPYEQDTYLLPEGDRKSYRLKEFVAILFKHKRRIAAIFFAVVFLVALISLMRTPVYEARSGLLIKIGREFLNSSELGAESRPVLAVNQEEVTNSEIQILTNRNLIKQVIAAVSLNKMYPELAKDPPKGRDPMEEAAFMFEKKLRVEAVKKSNVVWVSFRHEDPQIAAQAVNTLIDLFKEKHLEAYSTPRSSFLEQQLQTYEAKLKDSETKLQSFKQQKAVYQIEEQRTMLLQQRSDLDTVMKVSEHSIQELQKRVAHLKNQAKSMENNGIRYTASDRDNIIIEANNRLLNLKLTEQELSKKYKSDSYLVQNAREERQLVEEFIKKQETDTHAKVKTSNPVFQNVEMELVRAETELSSQKGKLAALRQQVKKLDSDIKSLDSHDQQLQELKRAQMIHAKNYETYAGKAEEARISEDMNRMKLANISVIQEATAPDRPLKRNRLLHMILATIAGGALGVGFAFFSEVTRQTFSSPKEVERRLGLPVLACIPHEEP*