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S21_scaffold_261_curated_6

Organism: S21_RifCSP_Pseudomonas_stutzeri_64_159_curated

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 14 / 38 MC: 3
Location: comp(7641..11711)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1212549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri B1SMN1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.9
  • Coverage: 1356.0
  • Bit_score: 2657
  • Evalue 0.0
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 99.9
  • Coverage: 1356.0
  • Bit_score: 2655
  • Evalue 0.0
  • rbh
DNA-directed RNA polymerase subunit beta n=1 Tax=Pseudomonas stutzeri B1SMN1 RepID=S6L247_PSEST similarity UNIREF
DB: UNIREF100
  • Identity: 99.9
  • Coverage: 1356.0
  • Bit_score: 2657
  • Evalue 0.0
  • rbh

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Taxonomy

Pseudomonas stutzeri → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4071
ATGGCTTACTCATACACTGAGAAAAAACGTATCCGCAAGGACTTTAGCAAGTTACCGCACGTGATGGACGTGCCGTATCTTTTGGCCATCCAGCTGGATTCGTATCGCGAATTCCTGCAGGCGGGAGCGACCAAAGATCAGTTCCGCGACATTGGCTTGCATGCAGCCTTCAAATCCGTTTTCCCGATTATCAGCTATTCCGGCAATGCAGCGCTGGAATACGTCGGCTATCGCCTGGGCGAGCCGGCTTTCGATGTCAAGGAATGTGTCCTGCGCGGCGTGACCTTCGCCGTTCCGCTGCGCGTCAAGGTGCGCCTGATCATTTTCGACAAAGAGTCGTCGAACAAGGCCATCAAGGACATCAAGGAACAGGAAGTCTACATGGGGGAAATCCCCCTCATGACCGAGAACGGTACCTTCATCATCAACGGTACCGAACGCGTCATCGTTTCCCAGCTGCATCGTTCGCCGGGCGTGTTCTTCGATCATGACCGCGGCAAGACCCATAGCTCCGGCAAGCTGCTGTACTCCGCGCGCATCATTCCTTACCGCGGCTCCTGGCTGGACTTCGAATTCGATCCGAAGGACGCAGTGTTCGTCCGTATCGACCGTCGCCGCAAGTTGCCGGCTTCGGTTCTTCTGCGTGCGCTCAATTACAGCACCGAAGAGATCCTGGACGCCTTCTACGATACCAACGTCTTCCACGTCAAAGGCGAAACCCTGGCGCTGGAACTGGTACCGCAGCGTCTGCGCGGCGAGATCGCTACTTTCGACATCAAGGATGACAGCGGCAAAGTCATCGTCGAGCAGGGCCGTCGCATCACTGCTCGCCACATCAACCAGCTCGACAAGTCCGGCATCAAAGAACTCGAGATGCCGATGGACTACGTCCTGGGTCGTACCGTCGCCAAGGCGATCGTGCACCCGGCCACCGGCGAGATCATCGCCGAGTGCAACACCGAGCTGACCGTCGACGTCATGGCGAAGATCGTCAAGGCGCAGGTCGTACGCTTCGAGACGCTGTACACCAACGACATCGATTGTGGTCCGTTCATTTCCGACACGCTGAAGATCGATTCGACCACCAATCAGCTCGAAGCGCTGGTCGAAATCTATCGCATGATGCGCCCGGGCGAGCCGCCAACCAAGGACGCCGCCGAGACGCTGTTCAACAACCTGTTCTTCGCTGCCGAGCGCTACGACCTGTCGGCTGTCGGCCGGATGAAGTTCAACCGTCGTATCGGCCGTACCGAGATCGAGGGCTCCGGCGTACTGAGCCGCGAGGACATCGTCGCGGTCCTGAAGACCCTGGTCGACATCCGCAACGGCAAGGGCATCGTTGACGACATCGATCACCTGGGTAACCGTCGCGTGCGCTGTGTCGGCGAAATGGCAGAAAACCAGTTCCGCGTTGGCCTGGTGCGCGTCGAGCGTGCGGTCAAAGAGCGTCTGTCGATGGCCGAAAGCGAAGGCCTGATGCCGCAGGACCTGATCAATGCCAAGCCGGTTGCGGCGGCGGTGAAGGAGTTCTTCGGTTCCAGCCAGCTCTCGCAGTTCATGGACCAGAACAACCCGCTTTCGGAGATCACCCACAAGCGCCGCGTTTCCGCACTCGGCCCGGGCGGTCTGACCCGTGAGCGTGCCGGCTTCGAGGTGCGTGACGTGCACCCGACTCACTACGGCCGCGTCTGCCCGATCGAAACTCCGGAAGGTCCGAACATCGGTCTGATCAACTCGCTGGCCGCCTACGCCCGCACCAACCAGTATGGCTTCCTGGAAAGTCCGTACCGAGTGGTCAAGGATGGCGAAGTCACCGACGAGATCGTATTCCTCTCGGCAATCGAAGAAGCCGACCACGTCATCGCTCAGGCCAGCGCCAAGCTGGACGGTCGCAAGCTGGTCGACGAGCTGGTGGCTGTGCGTCATCTGAACGAATTCACCGTCAAGGCGCCGGAAGACGTGACCCTGATGGACGTCTCTCCGAAGCAGGTCGTCTCCGTCGCTGCCTCGCTGATTCCGTTCCTCGAGCACGACGACGCCAACCGCGCGCTGATGGGTTCCAACATGCAGCGTCAGGCCGTGCCGACCCTGCGTTCGGACAAGCCGCTGGTAGGTACCGGCATGGAGCGCAACGTGGCACGCGACTCCGGCGTCTGCGTGGTCGCTCGTCGCGGCGGCGTGATCGACTCGGTCGATGCCAGCCGTATCGTGGTGCGCGTGCGTGACGATGAGGTCGAGACCGGCGAAGCGGGTGTCGACATCTATAACCTGACCAAGTACACCCGCTCCAACCAGAACACCTGCATCAACCAGCGTCCGCTGGTGCGCAAGGGTGACGTGGTGGCGCGTGGCGACATCATGGCCGACGGTCCGTCCACCGACATGGGCGAGCTGGCACTGGGTCAGAACATGCGCGTCGCGTTCATGCCGTGGAACGGCTACAACTTCGAGGACTCCATTCTCCTCTCGGAGCGCGTGGTTCAGGAAGATCGTTTTACCACTATCCATATCCAGGAACTGACCTGCGTGTCGCGCGACACCAAGCTCGGCCCAGAGGAGATCACCGCAGACATCCCGAACGTGGGTGAGGCTGCGCTGAACAAGCTGGACGAGGCCGGTATCGTCTACGTCGGTGCCGAAGTCGGCCCAGGCGACATCCTGGTCGGCAAGGTGACGCCGAAGGGCGAAACCCAGCTGACCCCGGAAGAGAAGCTGCTGCGTGCGATCTTCGGTGAGAAGGCTTCCGACGTGAAAGACACGTCCCTGCGTGTGCCGACCGGCACCAAGGGCACCGTCATCGACGTACAGGTGTTCATCCGCGACGGCGTCGAGCGCGACTCCCGTGCGCTGGCCATCGAGAAGATGCAGCTCGACGAGATCCGCAAGGACCTCAATGAAGAGTTCCGTATCGTCGAAGGCGCCACGTTCGAGCGTCTGCGCTCGGCCTTGGTCGGTGCGACTGCCGAGGGCGGTGCAGGTCTGAAGAAGGGTGTCGTGATCACCGACGAGATCCTCGACGGGCTCGAGCATGGCCAGTGGTTCAAGCTGCGCATGGCCGAAGACGCGCTGAATGAGCAGTTGGAGAAGGCCCAGGCCTACCTCTCCGATCGCCGTCAGCTGCTCGACGACAAGTTCGAAGACAAGAAGCGCAAGCTGCAGCAGGGCGACGACCTCGCACCGGGCGTGCTGAAGATCGTCAAGGTCTACCTGGCCATCAAGCGTCGCATCCAGCCGGGCGACAAGATGGCCGGTCGTCACGGTAACAAGGGTGTGGTCTCGGTGATCATGCCGGTCGAAGACATGCCCCATGATGCCAACGGTACGCCGGTGGACATCGTCCTGAACCCGCTGGGTGTACCGTCGCGTATGAACGTCGGGCAGATCCTCGAAACCCACCTGGGCCTTGCGGCCAAGGGCCTGGGCGAGAAGATCAACCTGATGCTCGAAGAGCAGCGCAAGGTCGCCGAGCTGCGCAAGTTCCTGCACGAGATCTACAACGAGATCGGCGGGCGTCAGGAGAATCTGGCCGACCTGAGCGATCAGGAAGTGCTGGACCTGGCGAACAACCTGCGCAAGGGCGTGCCGATGGCGACCCCGGTGTTCGACGGTGCCAAGGAGCGCGAGATCAAGGCCATGCTGAAGCTGGCCGATCTGCCGGAAAGTGGCCAGATGCAGCTGTTCGACGGCCGTACCGGTAATGCCTTCGAGCGCACCACCACCGTCGGCTACATGTACATGCTCAAGCTGAACCACCTGGTCGACGACAAGATGCACGCGCGTTCCACCGGTTCGTACAGCCTGGTCACCCAACAGCCGCTGGGCGGCAAGGCGCAGTTCGGTGGTCAGCGTTTCGGGGAGATGGAGGTCTGGGCCCTGGAGGCCTATGGCGCCGCGTACACCCTGCAGGAAATGCTCACGGTCAAGTCGGACGACGTGAACGGGCGGACCAAGATGTACAAGAACATCGTGGACGGCGATCACCGCATGGAGGCCGGCATGCCGGAGTCCTTCAACGTGCTGATCAAAGAAATCCGCTCGCTCGGTATCGATATCGATCTGGAAACCGAATAA
PROTEIN sequence
Length: 1357
MAYSYTEKKRIRKDFSKLPHVMDVPYLLAIQLDSYREFLQAGATKDQFRDIGLHAAFKSVFPIISYSGNAALEYVGYRLGEPAFDVKECVLRGVTFAVPLRVKVRLIIFDKESSNKAIKDIKEQEVYMGEIPLMTENGTFIINGTERVIVSQLHRSPGVFFDHDRGKTHSSGKLLYSARIIPYRGSWLDFEFDPKDAVFVRIDRRRKLPASVLLRALNYSTEEILDAFYDTNVFHVKGETLALELVPQRLRGEIATFDIKDDSGKVIVEQGRRITARHINQLDKSGIKELEMPMDYVLGRTVAKAIVHPATGEIIAECNTELTVDVMAKIVKAQVVRFETLYTNDIDCGPFISDTLKIDSTTNQLEALVEIYRMMRPGEPPTKDAAETLFNNLFFAAERYDLSAVGRMKFNRRIGRTEIEGSGVLSREDIVAVLKTLVDIRNGKGIVDDIDHLGNRRVRCVGEMAENQFRVGLVRVERAVKERLSMAESEGLMPQDLINAKPVAAAVKEFFGSSQLSQFMDQNNPLSEITHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLAAYARTNQYGFLESPYRVVKDGEVTDEIVFLSAIEEADHVIAQASAKLDGRKLVDELVAVRHLNEFTVKAPEDVTLMDVSPKQVVSVAASLIPFLEHDDANRALMGSNMQRQAVPTLRSDKPLVGTGMERNVARDSGVCVVARRGGVIDSVDASRIVVRVRDDEVETGEAGVDIYNLTKYTRSNQNTCINQRPLVRKGDVVARGDIMADGPSTDMGELALGQNMRVAFMPWNGYNFEDSILLSERVVQEDRFTTIHIQELTCVSRDTKLGPEEITADIPNVGEAALNKLDEAGIVYVGAEVGPGDILVGKVTPKGETQLTPEEKLLRAIFGEKASDVKDTSLRVPTGTKGTVIDVQVFIRDGVERDSRALAIEKMQLDEIRKDLNEEFRIVEGATFERLRSALVGATAEGGAGLKKGVVITDEILDGLEHGQWFKLRMAEDALNEQLEKAQAYLSDRRQLLDDKFEDKKRKLQQGDDLAPGVLKIVKVYLAIKRRIQPGDKMAGRHGNKGVVSVIMPVEDMPHDANGTPVDIVLNPLGVPSRMNVGQILETHLGLAAKGLGEKINLMLEEQRKVAELRKFLHEIYNEIGGRQENLADLSDQEVLDLANNLRKGVPMATPVFDGAKEREIKAMLKLADLPESGQMQLFDGRTGNAFERTTTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGDHRMEAGMPESFNVLIKEIRSLGIDIDLETE*