ggKbase home page

S22_scaffold_32_curated_19

Organism: S22_RifCSP_P_lavamentivorans_63_78_curated

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: 19925..20665

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000255|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000255|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000255|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000255|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000255|HAMAP-Rule:MF_00171}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.6
  • Coverage: 246.0
  • Bit_score: 452
  • Evalue 2.50e-124
tRNA pseudouridine synthase A n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=TRUA_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 88.6
  • Coverage: 246.0
  • Bit_score: 452
  • Evalue 1.80e-124
  • rbh
tRNA pseudouridine synthase A similarity KEGG
DB: KEGG
  • Identity: 88.6
  • Coverage: 246.0
  • Bit_score: 452
  • Evalue 5.00e-125
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Parvibaculum lavamentivorans → Parvibaculum → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 741
ATGCCGCGCTACAAGCTCACCATCGAATATGACGGCTCGCCCTTTGTCGGCTGGCAGGCGCAGACGAACGGTCTTTCCGTGCAGCATGTGCTCGAAGCGGGCTTCAAGGGCTTCTGCGGAGAGGATGTGAAGGTGAACGGCGCGGGCCGCACCGATGCCGGCGTTCACGCGCTGGGCCAGGTCGCGCATGTGGACCTCGCGCGCGACATTGCCTGCGACACGCTGCGCGACGCGGTGAACGCGCATATGCGTCCGCATCCCGTTGCGATCGTGGAAGCGGAAGAAGTGCCGGATACGTTCGAGGCGCGCTTCTCCGCCGTGAAGCGCCACTACATGTACCGCATCGTCAATCGCCGCGCGCCGCTGACGCTCGACCGCGGTCAGGCCTGGCTCGTGCACAAACCGCTCGACGCGGAAGCGATGCACAATGCGGCGCAGGCGCTGGTCGGCCGCCACGATTTCACGACCTTCCGCTCCGTCCAGTGCCAGGCGAAATCGCCGGTGAAGACGGTCGATGAAATTTCCGTGTCGCGCTATGCCGACGAGATCGAAGTGATCTGCCGTGCACGGAGCTTCCTGCACAATCAGGTGCGCTCCTTCGTCGGCACATTGAAGATGGCGGGCGAGGGCAAGTGGACACGCCGCGACATCGAAAAGGCGCTCGCCGCAAAAGACCGCTCCGCCTGCGGCCCCGTCGCCCCGCCGGACGGGCTTTATCTTCTGCAAGTGGATTATGAGTGA
PROTEIN sequence
Length: 247
MPRYKLTIEYDGSPFVGWQAQTNGLSVQHVLEAGFKGFCGEDVKVNGAGRTDAGVHALGQVAHVDLARDIACDTLRDAVNAHMRPHPVAIVEAEEVPDTFEARFSAVKRHYMYRIVNRRAPLTLDRGQAWLVHKPLDAEAMHNAAQALVGRHDFTTFRSVQCQAKSPVKTVDEISVSRYADEIEVICRARSFLHNQVRSFVGTLKMAGEGKWTRRDIEKALAAKDRSACGPVAPPDGLYLLQVDYE*