ggKbase home page

S22_scaffold_48_curated_26

Organism: S22_Xanthobacter_67_227_curated

near complete RP 52 / 55 BSCG 51 / 51 ASCG 11 / 38
Location: comp(34800..35054)

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein Hfq n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7INM0_XANP2 similarity UNIREF
DB: UNIREF100
  • Identity: 97.6
  • Coverage: 84.0
  • Bit_score: 171
  • Evalue 2.00e-40
RNA chaperone Hfq similarity KEGG
DB: KEGG
  • Identity: 97.6
  • Coverage: 84.0
  • Bit_score: 171
  • Evalue 5.80e-41
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.6
  • Coverage: 84.0
  • Bit_score: 171
  • Evalue 2.90e-40

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Xanthobacter autotrophicus → Xanthobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 255
ATGGCGGCGGAACGGACACAAAATCTCCAAGACACTTTTCTCAATCACGTCCGCAAGAGCAAGACTCCCCTCACGATTTTCCTGGTGAACGGAGTGAAATTGCAGGGCGTCGTCACTTGGTTTGATAATTTCTGCGTGCTCCTGCGCCGGGACGGTCATTCGCAGCTGGTTTACAAGCACGCCATTTCCACCATCATGCCGGGACATCCGGTTCAGTTGTTCGATCCCACGGATGATGGGGGAGAAAAGGCTTAA
PROTEIN sequence
Length: 85
MAAERTQNLQDTFLNHVRKSKTPLTIFLVNGVKLQGVVTWFDNFCVLLRRDGHSQLVYKHAISTIMPGHPVQLFDPTDDGGEKA*