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S23_scaffold_36_curated_17

Organism: S23_RifCSP_Comamonadaceae_63_35_curated

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: 15441..16076

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-28 subunit FliA/WhiG id=12553402 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 87.3
  • Coverage: 213.0
  • Bit_score: 361
  • Evalue 4.60e-97
  • rbh
RNA polymerase sigma-28 subunit FliA/WhiG similarity KEGG
DB: KEGG
  • Identity: 85.3
  • Coverage: 211.0
  • Bit_score: 353
  • Evalue 3.50e-95
  • rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 87.3
  • Coverage: 213.0
  • Bit_score: 361
  • Evalue 6.40e-97

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Taxonomy

RLO_Burkholderiales_65_40 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 636
ATGATTGCCAAGCTCCCTGCCAATGTAGAGCTGGACGATCTGATCCAGGTAGGAATGATCGGATTGTCTGAGGCACTCACACGCTATGAGGTGGCACAAGGTGTGCAGTTCGAAACTTTTGCCACACAGCGCATCCGCGGCGCCATGCTCGATGAATTGCGTGAGAGCGACTGGATGTCGCGCAGCTCGCGCAAAAGCCAAAAAGATATTGAAAAAGCCCTGCGCCGCCTGGAGCAAAAGCTGGGGCGCAGCCCGCTGGAGTCTGAAATCGCTGCCGAACTGGATATGGCACTGGTCGACTACCAAAGCCTGCTGAGCAAGGTGCGCGGCACCCAACTGGTGTATCTGGAAGACATGTCGCACAGCGAAGATGACGACGGGTTCCTGGAACACCACGATGCCGCAGATCCCGCAGGCGACCCCATGGCCATGCTGCGTAACCAGCGCCTGCGCTCCTCACTGGTCACTGCCATTCAATCATTGCCCGAGCGCGAACAGTACATCATGGGCATGTACTACGAACACGACATGAATCTCAAGGAAATTGCGGCTGTGCTGGGTGTGACCGAATCACGGGTTTGCCAGTTGCACAGCCAGTCGATTGCCCGATTACGCGCAAAAATGCGCAGCCACTGA
PROTEIN sequence
Length: 212
MIAKLPANVELDDLIQVGMIGLSEALTRYEVAQGVQFETFATQRIRGAMLDELRESDWMSRSSRKSQKDIEKALRRLEQKLGRSPLESEIAAELDMALVDYQSLLSKVRGTQLVYLEDMSHSEDDDGFLEHHDAADPAGDPMAMLRNQRLRSSLVTAIQSLPEREQYIMGMYYEHDMNLKEIAAVLGVTESRVCQLHSQSIARLRAKMRSH*