ggKbase home page

S24_scaffold_2756_curated_2

Organism: S24_RifOxy_Desulfosporosinus_43_10_curated

near complete RP 48 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 13 / 38
Location: comp(635..1297)

Top 3 Functional Annotations

Value Algorithm Source
Looped-hinge helix DNA binding domain, AbrB family n=1 Tax=Desulfosporosinus meridiei (strain ATCC BAA-275 / DSM 13257 / NCIMB 13706 / S10) RepID=J7IWG9_DESMD similarity UNIREF
DB: UNIREF100
  • Identity: 78.6
  • Coverage: 220.0
  • Bit_score: 351
  • Evalue 4.90e-94
  • rbh
AbrB family transcriptional regulator {ECO:0000313|EMBL:KGK89796.1}; TaxID=1487923 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. HMP52.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.5
  • Coverage: 220.0
  • Bit_score: 356
  • Evalue 1.60e-95
AbrB family DNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 78.6
  • Coverage: 220.0
  • Bit_score: 351
  • Evalue 1.40e-94
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Desulfosporosinus sp. HMP52 → Desulfosporosinus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 663
ATGGAGACTTATCGGGTAAAAGTTGGCGCGAAAGGAGAAATCGTTTTACCCTTAGAATTGCGCAAGCTCTTTGGACTGGTTGCAGAGGATACATTAGATTTATGTGTGGATTCAGAAGGGAAAGTTTTTGTACGAACAGCGGAACGCTCTGTTAGCCCACTTTCAGATTTCTTTGAGGATTTGATTATCGGCGACTTACTAGCTGAAGGATGTACTGGCGATTGTTTAAAAGCTAAACTATTAGAGTGTAAATTAAAACTAAGTACCGTACTTGATCGTTTGTCCGAAGAAGCTCACCGAGCACACAAAAATGGCCAATCGATCAGATGGTGGGAAACTCAAGCACTAGCCTCCCATTGTAGTAATAAGTCCTCCAGCGGTAAATATGATGTCATGCTTACCACCCGTAGTATCCATGATATTGCCGTCCTGCGGGCAGCTGAGCTCCGAGAGATTCCAGCGGTCTTTGAGAGCTTAGAACAGGACCCTCTGTCGTTTAAGCGGCTGAAAGGGCCTTATTACGAGACTTACAGGGTATCTTTCCGCAGTGAATCGAAAGAATATCGCGTAATTTACACCGTCTTTGCCCCAGAAAATCTAATAGCGATTTTAACCGTAGGCGCGCGCGAGGTACTCTACGAACGGCTTAACGGCATAGCATAA
PROTEIN sequence
Length: 221
METYRVKVGAKGEIVLPLELRKLFGLVAEDTLDLCVDSEGKVFVRTAERSVSPLSDFFEDLIIGDLLAEGCTGDCLKAKLLECKLKLSTVLDRLSEEAHRAHKNGQSIRWWETQALASHCSNKSSSGKYDVMLTTRSIHDIAVLRAAELREIPAVFESLEQDPLSFKRLKGPYYETYRVSFRSESKEYRVIYTVFAPENLIAILTVGAREVLYERLNGIA*