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S24_scaffold_5667_curated_3

Organism: S24_Selenomonadales_60_8_curated

near complete RP 49 / 55 MC: 4 BSCG 47 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: comp(1884..2234)

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=401526 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Thermosinus.;" source="Thermosinus carboxydivorans Nor1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.5
  • Coverage: 112.0
  • Bit_score: 71
  • Evalue 7.30e-10
2'-5' RNA ligase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HSF5_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 37.5
  • Coverage: 112.0
  • Bit_score: 71
  • Evalue 5.20e-10

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Taxonomy

Thermosinus carboxydivorans → Thermosinus → Selenomonadales → Negativicutes → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 351
ATGCGCCTGTTCGTCGGCGGCGTGCCCGTGCGGACGGTGTGGGTGGACATTGGCGGCGATACGGCGGCGCTGCAGGCGCTGCAGGGCAGGGTGGAGCAAGCGCTGGCCGGGTGTGGGTTCGCGCCGGAGCAGCGGGCGTGGCGGCCGCACATTACCCTTGCCCAGGATGTAGTGCCCCTGCCGGGTGCGCCGCCCCGGGGCGCCAACCAGGTCGACGGTACGCCTTTCACGGTGCGCGACTTCGCCCTTATCCTCAGCGAGGAGATCGACCGCCGGCGGGTTTACACGCCGATCGAACGGTTTGCCCTGCCGGGCCGGGGGCAGGAATTTTTCTCCACCAGAACGAAATAA
PROTEIN sequence
Length: 117
MRLFVGGVPVRTVWVDIGGDTAALQALQGRVEQALAGCGFAPEQRAWRPHITLAQDVVPLPGAPPRGANQVDGTPFTVRDFALILSEEIDRRRVYTPIERFALPGRGQEFFSTRTK*