ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

S24_scaffold_8653_curated_3

Organism: S24_Selenomonadales_60_8_curated

near complete RP 49 / 55 MC: 4 BSCG 47 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: comp(1620..1889)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S20 n=1 Tax=Sporomusa ovata DSM 2662 RepID=T0IUY0_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 77.3
  • Coverage: 88.0
  • Bit_score: 129
  • Evalue 9.40e-28
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=1123288 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Sporomusa.;" source="Sporomusa ovata DSM 2662.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.3
  • Coverage: 88.0
  • Bit_score: 129
  • Evalue 1.30e-27
30S ribosomal protein S20 similarity KEGG
DB: KEGG
  • Identity: 71.6
  • Coverage: 88.0
  • Bit_score: 127
  • Evalue 1.30e-27

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sporomusa ovata → Sporomusa → Selenomonadales → Negativicutes → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 270
TTGCCGAACATCAAATCTTCGGAACGCAGCGTTAAAACCGACGCTTCCCGGCGCGCCCAGAATTTCTCCGTCAAATCCGCGGTGAAGACCGCCACCCGCAAAGTGGCCGAAACGGTCACGGCCGGAAAAGCCGACGACGCTACGGCCCTCCTGACCAAAGCTAGCAGCGTGATTGACAAAGCGGCCGCCAAAGGCGTTATTCATAAAAATGCCGCCGCGCGGAAAAAGTCCCGTCTGGCGAAGAAAATCAACGCCATCGAAAGCAAGTAA
PROTEIN sequence
Length: 90
LPNIKSSERSVKTDASRRAQNFSVKSAVKTATRKVAETVTAGKADDATALLTKASSVIDKAAAKGVIHKNAAARKKSRLAKKINAIESK*