ggKbase home page

S24_scaffold_2335_curated_1

Organism: S24_Selenomonadales_60_8_curated

near complete RP 49 / 55 MC: 4 BSCG 47 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: comp(1..255)

Top 3 Functional Annotations

Value Algorithm Source
Formamidopyrimidine-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103, ECO:0000256|SAAS:SAAS00020852}; Short=Fapy-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103};; EC=3.2.2.23 {ECO:0000256|HAMAP-Rule:MF_00103};; DNA-(apurinic or apyrimidinic site) lyase MutM {ECO:0000256|HAMAP-Rule:MF_00103}; TaxID=1123288 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Sporomusa.;" source="Sporomusa ovata DSM 2662.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.3
  • Coverage: 83.0
  • Bit_score: 126
  • Evalue 1.10e-26
Formamidopyrimidine-DNA glycosylase (EC:3.2.2.23) similarity KEGG
DB: KEGG
  • Identity: 66.7
  • Coverage: 84.0
  • Bit_score: 118
  • Evalue 7.70e-25
Formamidopyrimidine-DNA glycosylase n=1 Tax=Sporomusa ovata DSM 2662 RepID=T0IIR1_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 72.3
  • Coverage: 83.0
  • Bit_score: 126
  • Evalue 7.60e-27

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sporomusa ovata → Sporomusa → Selenomonadales → Negativicutes → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 255
ATGCCGGAGATGCCGGAAGTCGAAACGATTCGCCGCACGCTGACCGATAAGGTGACGGGGCGGCGGATCACGGATGTTAATATGCTGCTGCCGCGCCTGGTGAAGTGGCCTTCCCCCGATGAGTTCCGGGCGGTGGTGACGGATTCGGTCATTACGCGGCTTGACCGCCGCGGCAAGTATCTGCTGTTTTATCTGGATAACGATAAGGTGATGGTGGTGCATCTGCGCATGACCGGTCGGCTTTACCATGTCGCG
PROTEIN sequence
Length: 85
MPEMPEVETIRRTLTDKVTGRRITDVNMLLPRLVKWPSPDEFRAVVTDSVITRLDRRGKYLLFYLDNDKVMVVHLRMTGRLYHVA