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S25_scaffold_2024_curated_5

Organism: S25_RifleGW_Geobacter_56_8_curated

megabin RP 39 / 55 MC: 13 BSCG 44 / 51 MC: 17 ASCG 12 / 38 MC: 2
Location: comp(3710..4729)

Top 3 Functional Annotations

Value Algorithm Source
Two component, sigma-54 specific, transcriptional regulator, Fis family n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G7F8_GEOUR similarity UNIREF
DB: UNIREF100
  • Identity: 85.8
  • Coverage: 339.0
  • Bit_score: 570
  • Evalue 1.00e-159
  • rbh
Acetoacetate metabolism regulatory protein AtoC {ECO:0000313|EMBL:GAM11480.1}; TaxID=1266765 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. OR-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.5
  • Coverage: 337.0
  • Bit_score: 573
  • Evalue 1.00e-160
two component sigma-54 specific Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 85.8
  • Coverage: 339.0
  • Bit_score: 570
  • Evalue 2.90e-160
  • rbh

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Taxonomy

Geobacter sp. OR-1 → Geobacter → Desulfuromonadales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1020
ATGGTGATCGACAAGGCGTACGAGAAAAACCGGCTGCGTTACGAGAATATCAACCTGAAGCTGGAAATCAGCAAGATGGACAAGCACCGGATTGTCGGCAAAAGCCTGCCTCTTCAGAAGGTACTCGAAACAGTCAGGCGGTATGGACCTACCGACGAACACGTTCTCATCTGCGGCGAGAGCGGGGCGGGAAAAGAGTTGTTTGCCAGGGCTGTGCATGACGCCAGCCGCAGGGCCAGCAAGCCGTTCGTCACCGTAAACTGCGGGCGGCTCAACGTTAACACCGCCGAAAGCGAGCTTTTCGGGCATGTGCAGGGAGCCTTCACCGGTGCGAACAAAGGGCGTGCCGGTCTTTTCGAACTCGCCGATACAGGTACGCTGTTCATGGATGAAGTATCGGAAACCCCGCTGGACGTCCAGGTGAAGCTCCTCCGCATCCTTGAAACCGGGACCTTTCGCCGGCTGGGGGGGAACCACGATATCAGCGTTAATGTCCGGTTTGTCTTCGCCTCGAACAAAAAGCTTGATGAGTGCGTGGAACGGGGGGAATTCCGGGAAGATCTGTATCACCGCATCAACCTGCTGTCGATCACCATTCCTCCTTTGCGGGAGCGCCACGATGATATCATTGCGCTCGCCTATTACTTCCTCAAATCGGCAAGCGATGCCGGGTCGGATTCATGGGAAATTACCGAAGAGGCGGCGGCTGCCCTTTGCGCCTACTCCTGGCCCGGCAACGTCAGAGAGTTGCGCAACAnnnnnnnnnnnnnnnnnATCCTGGCAACGGAGCCGATCATTTCCTCAGACCTGTTGCCCTTCTCGCCACCAAAATCAATGCCGTCAGCTGCCGTTAATGGAACCTCCGAAGTGCGGGAACTGCCCCTCTGGGTCATCGAGCGGGACCATATCCAGAAGGTGCTGGAGAAGGTTGAGGGGAACAAGAGCAAGGCAGCCAAGGTACTGGAAATAGACCGGAAAACGCTGTATACCAAGCTGGAACGATATGGCCTTGCGACGTAA
PROTEIN sequence
Length: 340
MVIDKAYEKNRLRYENINLKLEISKMDKHRIVGKSLPLQKVLETVRRYGPTDEHVLICGESGAGKELFARAVHDASRRASKPFVTVNCGRLNVNTAESELFGHVQGAFTGANKGRAGLFELADTGTLFMDEVSETPLDVQVKLLRILETGTFRRLGGNHDISVNVRFVFASNKKLDECVERGEFREDLYHRINLLSITIPPLRERHDDIIALAYYFLKSASDAGSDSWEITEEAAAALCAYSWPGNVRELRNXXXXXXILATEPIISSDLLPFSPPKSMPSAAVNGTSEVRELPLWVIERDHIQKVLEKVEGNKSKAAKVLEIDRKTLYTKLERYGLAT*