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S25_scaffold_8672_curated_1

Organism: S25_RifleGW_Geobacter_56_8_curated

megabin RP 39 / 55 MC: 13 BSCG 44 / 51 MC: 17 ASCG 12 / 38 MC: 2
Location: comp(3..770)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=345632 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.0
  • Coverage: 224.0
  • Bit_score: 352
  • Evalue 3.60e-94
Ribonuclease E n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GAD1_GEOUR similarity UNIREF
DB: UNIREF100
  • Identity: 83.5
  • Coverage: 224.0
  • Bit_score: 349
  • Evalue 1.70e-93
  • rbh
ribonuclease E similarity KEGG
DB: KEGG
  • Identity: 83.0
  • Coverage: 224.0
  • Bit_score: 352
  • Evalue 7.30e-95

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Taxonomy

Geobacter pickeringii → Geobacter → Desulfuromonadales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 768
ATGAAAGACCATGTCGTCGCGCAGGCATTGCCTCGGGGCGCTTTAATAAACAGGGACGGGACGGACATTCTGCCTCGTCATGAAGGGTTCAAAGCAATGGCGAGAAAAATGCTCATCAATGTGATGCATCCGGAAGAAGCCAGGGTGGCCATCGTCGAAGATGGCTCACTGGTGGAGCTGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTGTGTACAAGGGAGTCGTCGTGCGGGTGGAACCGGGTCTGCAGGCGGCATTCGTCGACATCGGCCTGAAGAAACTCGGCTTCCTGCAGATGGGTGAACTCCATCCCGATTTCTGGCAATGGCGGGACGATATTCCCGAAGACCAGCGGAAGCGGCGGCCGCGAATCCAGGAGGTGCTGCGGCGCGGCCAGGAAATCATCGTTCAGGTGGAGAAGGGGGAGCGCGATAATAAAGGTGCGGCTCTCACCACCTATGTGTCGCTGCCGGGGCGCTACATGGTGCTCATGCCGGGAAGCGACTCTGCGGGGATTTCACGCAAGGTGGAGAGCGAGAGCGAGCGGAAGAAGCTGAAGGCGATGGCTGCCGAGATGGAGATACCTGAAGGTATCGGCTACATCATCCGGACCGAGGCGCTGGGGCGGAAACAAACGGAGATGGTCAAGGACCTTGAGTATCTGCTGGAGGTCTACGATACGATCAAAACGAAGGCGGCGGTGACCAAGGCCCCGGCGTTGATCTATCAGGAGTCGGACCTGGTGATCCGGACGATC
PROTEIN sequence
Length: 256
MKDHVVAQALPRGALINRDGTDILPRHEGFKAMARKMLINVMHPEEARVAIVEDGSLVELXXXXXXXXXXXXXVYKGVVVRVEPGLQAAFVDIGLKKLGFLQMGELHPDFWQWRDDIPEDQRKRRPRIQEVLRRGQEIIVQVEKGERDNKGAALTTYVSLPGRYMVLMPGSDSAGISRKVESESERKKLKAMAAEMEIPEGIGYIIRTEALGRKQTEMVKDLEYLLEVYDTIKTKAAVTKAPALIYQESDLVIRTI