ggKbase home page

S25_scaffold_6095_curated_2

Organism: S25_RifleGW_Geobacter_56_8_curated

megabin RP 39 / 55 MC: 13 BSCG 44 / 51 MC: 17 ASCG 12 / 38 MC: 2
Location: 1018..2388

Top 3 Functional Annotations

Value Algorithm Source
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M4K5_GEODF similarity UNIREF
DB: UNIREF100
  • Identity: 86.2
  • Coverage: 456.0
  • Bit_score: 791
  • Evalue 3.90e-226
  • rbh
Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 86.2
  • Coverage: 456.0
  • Bit_score: 791
  • Evalue 1.10e-226
  • rbh
Sigma-54-dependent transcriptional response regulator {ECO:0000313|EMBL:ACM19731.1}; TaxID=316067 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.2
  • Coverage: 456.0
  • Bit_score: 791
  • Evalue 5.40e-226

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Geobacter daltonii → Geobacter → Desulfuromonadales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1371
ATGAGAAAGACGAAGATTCTGGTTGTTGATGACGAGCACCTGATCAGATGGTCACTCGAGCAGAACCTCAAGAAGCAGGGTTATGAGGTTTTTACGGCGGGTAATGGCGAGGATGCTCTGAAACTGGTGCGGGAAGACCAACCGGACCTGATACTGCTCGATATTCAGCTCCCGGGCATCAGTGGTCTGGAAGTTCTTGAAAAAGTAAAGGAAACTGACGAAGAAATTGTTGTAATCATGGTGACCGCCCACGGTGGGCTGGAAACAGCCGTCAATGCAATGCGGCTTGGGGCATATGATTATATCAACAAGCCGTTCAACCTTGATGAAATGGCCATTGTCATCAAAAAAGCATTGGAAACCTCCGACCTGCGCAGGGAAGTGGCCAGTTTGCGCAGCGAGCACAAGAAATTCGGTCCGCCCCGCATCATCGGGAACAGCAAGCATATGCAGAATGTTCTCGACATGATGGCCAAGGTGGCGCGTAGCGAAGCCTCAACCGTGCTGATTCAGGGTGAATCAGGCACAGGCAAGGAATTGGTTGCTAAATGGATTCACTACGAATCTAACCGGGCTGAAAAGCCTTTTGTCGCCATCAACTGTGCTTCAGTACCGTCCACCCTGCTTGAAAGTGAATTATTCGGTCATGAAAAAGGCTCTTTTACCGATGCAAAGGTTACAAAAAAAGGACTTTTTGAACTGGCGGACGGGGGAACGGTATTTCTCGACGAAATCGGCGATATGGAAGTGGGCATGCAGGCGAAGCTTCTCCGGTTTCTAGAGGACCGCACCTTTCGCAGAATTGGTGGGACGAAGGCGATTTCAGTCGATGTCCGCATCATCTCTGCAACCAACAAGGACCTCCTGAAGTCTATTGAAGATAAGACCTTCAGGAACGATCTCTACTACCGCCTCCAGGTTATCCCGATATTTCTTCCCCCCCTCCGGGAGAGGCGGGACGATATTCTTCAGATCGTCTCCTACTTCATCGAGCACTTCAACCGGGAATTCAACAAGCATGTGAAAGGCATTTCTTCCATGGCCGAGAAGATGCTTATCGATTATCACTGGCCAGGCAACATCCGCGAATTGAAAAATGTTGTTGAGCGAGCCATTATCCTGGGAAATGAAGAAACCCTGCTACTCGAACACCTGCCACTTGAAATCGTCGCAAAAAGTACATCATCCTGTGCCTCCGTTACCACGTTCAAACTTCCTCCCGAAGGAGTCGACATCGAAGAGGTTGAAAAGGAGTTGATTCGCCAGGCGCTGGACAATAATGACTGGAATCAGTCCAAGGCGGCAAAAAAACTCAACCTGGGCATCGATGCGTTCCGCTATCGCATGAAAAAATTTGGCTTCCTGAAGTAG
PROTEIN sequence
Length: 457
MRKTKILVVDDEHLIRWSLEQNLKKQGYEVFTAGNGEDALKLVREDQPDLILLDIQLPGISGLEVLEKVKETDEEIVVIMVTAHGGLETAVNAMRLGAYDYINKPFNLDEMAIVIKKALETSDLRREVASLRSEHKKFGPPRIIGNSKHMQNVLDMMAKVARSEASTVLIQGESGTGKELVAKWIHYESNRAEKPFVAINCASVPSTLLESELFGHEKGSFTDAKVTKKGLFELADGGTVFLDEIGDMEVGMQAKLLRFLEDRTFRRIGGTKAISVDVRIISATNKDLLKSIEDKTFRNDLYYRLQVIPIFLPPLRERRDDILQIVSYFIEHFNREFNKHVKGISSMAEKMLIDYHWPGNIRELKNVVERAIILGNEETLLLEHLPLEIVAKSTSSCASVTTFKLPPEGVDIEEVEKELIRQALDNNDWNQSKAAKKLNLGIDAFRYRMKKFGFLK*