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S25_scaffold_4402_curated_2

Organism: S25_RifleGW_Geobacter_56_8_curated

megabin RP 39 / 55 MC: 13 BSCG 44 / 51 MC: 17 ASCG 12 / 38 MC: 2
Location: 235..1656

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-54 factor n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G5S6_GEOUR similarity UNIREF
DB: UNIREF100
  • Identity: 77.0
  • Coverage: 474.0
  • Bit_score: 718
  • Evalue 3.30e-204
  • rbh
RNA polymerase sigma-54 subunit RpoN similarity KEGG
DB: KEGG
  • Identity: 77.0
  • Coverage: 474.0
  • Bit_score: 718
  • Evalue 9.40e-205
  • rbh
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.0
  • Coverage: 474.0
  • Bit_score: 718
  • Evalue 4.60e-204

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Taxonomy

Geobacter uraniireducens → Geobacter → Desulfuromonadales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1422
ATGAAACTGGTACAGCAGCnnnnnnnnnnnnnnnnnnnnnnnnnnnnnATAAAGCTTCTGCAACTTTCCCGCATGGAACTGCAGGATGTGGTGCGGCAGGAGCTGGAAGAAAACCCGGTGCTGGACGAGACGCCGGAGATGGATGAGGCGATCGAGGTCGAGCAATTCGAGCTTTCCGAGAAGGAGATGGGGCCGGAGGAGGCTTCCACCGAATTCAAGGAAGTGAAGACGGGGGAGGAAACGCTGCGGGATTGGGATTCCTACCTTGAGGGATACAATTACAGCTCTGGCGAACAATACTATGACGATGACGATGATCGTCCTTCCTACGAAAACATTCTGACCAAAAAGGGGACGCTGGTCGATCACCTCATGTGGCAGCTCAACCTGACCAGGTTCACGGAGGAAGAATGCGCCGTTGGTGCCGAAATTATCGGCAACATCGATGAAAACGGGTATTTCAGAGCATCGCTCGGCGATGTGGCTTCCGTCTGCAATGTGGAGGAGCCGTTCGTCGAGGGGGTTCTCGAACGGATACAGGAATTCGATCCTCCCGGGACAGGTGCCCGCGATCTGCGCGAATGTCTGCTTATCCAGGCCCAGCAGCTCAGTATGGCAGGGACCCTGGTAGAAATCATCATCCGCAACCATCTCCAGGACCTGGAGAACCGCAAGTACAAGCAGATCGCAAAGGCCATGGGGTGCGAGGTCAATGACGTCCTCCTGTCGGCAAAGATCATTGCCACCCTCGAACCGCAGCCAGGAAGGGTATACTGTCAGGATGAAGTTCACTACATCTCCGCCGACATCTTCGTGTACAAGATCGGTGAGGAATATGTAGTGGTCCTCAATGACGAGGGTTTGCCGAGCCTGCGGATCAACCCCCTGTACGTGGGAGAGTGGAAAAACGGGCCGCAGGTCGACAGCAAGGCAGAGGAATATGTCAGCGACAAGATGCGTTCGGCAATGTGGCTGATCAAAAGCATACACCAGCGGCAGCGCACTATTTACAAGACGGCGAAAAGCATCGTCAAGTTCCAGCGGGAATTCTTCGACAAGGGGATCGAGTACCTGAAGCCGCTGGTGCTGCGGGACGTGGCCGAAGATATCGGCATGCATGAATCCACCATCAGCCGCGTCACCACCAACAAGTACATGCAGACACCCCAGGGGCTGTTCGAGCTGAAATACTTCTTCAACAGCGGCATTTCCACCAACGGCGGCGATTTTATCGCCTCGGAAAGCGTCAAGAACAAGATCAGGGAGATCGTCGAAGCCGAAGACCCGCGAAAGCCTTATAGCGATCAGTGCCTTGCCGAACTGTTGTCAGCCCATAACATCAACATTGCTCGCAGAACCGTCACCAAGTACCGGGAGATGCTCCGCATCGGGTCGTCGTCGGAAAGAAAAAGATTTTTCTAG
PROTEIN sequence
Length: 474
MKLVQQXXXXXXXXXXIKLLQLSRMELQDVVRQELEENPVLDETPEMDEAIEVEQFELSEKEMGPEEASTEFKEVKTGEETLRDWDSYLEGYNYSSGEQYYDDDDDRPSYENILTKKGTLVDHLMWQLNLTRFTEEECAVGAEIIGNIDENGYFRASLGDVASVCNVEEPFVEGVLERIQEFDPPGTGARDLRECLLIQAQQLSMAGTLVEIIIRNHLQDLENRKYKQIAKAMGCEVNDVLLSAKIIATLEPQPGRVYCQDEVHYISADIFVYKIGEEYVVVLNDEGLPSLRINPLYVGEWKNGPQVDSKAEEYVSDKMRSAMWLIKSIHQRQRTIYKTAKSIVKFQREFFDKGIEYLKPLVLRDVAEDIGMHESTISRVTTNKYMQTPQGLFELKYFFNSGISTNGGDFIASESVKNKIREIVEAEDPRKPYSDQCLAELLSAHNINIARRTVTKYREMLRIGSSSERKRFF*