ggKbase home page

S28_scaffold_3822_curated_2

Organism: S28_RifleBG_Ignavibacteria_36_39_curated

near complete RP 49 / 55 MC: 3 BSCG 48 / 51 MC: 5 ASCG 13 / 38 MC: 3
Location: 635..1219

Top 3 Functional Annotations

Value Algorithm Source
Marine sediment metagenome DNA, contig: S01H4_L02512 {ECO:0000313|EMBL:GAG71090.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.8
  • Coverage: 194.0
  • Bit_score: 308
  • Evalue 5.90e-81
ECF subfamily RNA polymerase sigma-70 factor id=4020120 bin=GWF2_Ignavibacteria_35_20 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria similarity UNIREF
DB: UNIREF100
  • Identity: 75.3
  • Coverage: 194.0
  • Bit_score: 297
  • Evalue 9.70e-78
rpoE; ECF subfamily RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 72.7
  • Coverage: 187.0
  • Bit_score: 282
  • Evalue 5.40e-74

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

marine sediment metagenome

Sequences

DNA sequence
Length: 585
ATGGATATAAAGCTCCGTGAACTTTCGGATGAAGAGCTGATTCTTGAGTTCCAGAAGAACAACACGGAAGACGCCTTTAACATACTTGTCCAGAGATATAAAAATCCGTTAACCAATTTTGTGTTCAGATTTTTAGGTAATTATGCAAGCTGTGCAGATGTTGTTCAGGAAACGATGATAAAGGTTTACAGGTATAAAGATGCATACAATTCAGTGGCAAAATTCTCAACCTGGATTTATACCATTGCAGGCAATCTTGCTCGGACTGAATACAGGCGGCAGAGAAGACAAAACTTTTTTTCAATCAGCGATTATGGAGAAGAGCATCAGACTTACGATTTGCCTGATGAAAGTTATAGACCGGATGTTATTACAGACAGCGGCATTAAAGATGAAATAATTCAAAAAGCATTATTGAAAGTAAAAGAGACATATAGAGAAGCAGTAATTCTCCGGGATATTCAGGGATTGAGCTATGAAGAAATTTCTGAAATTCTCGGAGTAAATGAGGGAACAGTTAAATCAAGAATAAACAGAGGAAGAGCACAATTACAGGAATTGCTGAAAGGCATTTACAAAGAATAG
PROTEIN sequence
Length: 195
MDIKLRELSDEELILEFQKNNTEDAFNILVQRYKNPLTNFVFRFLGNYASCADVVQETMIKVYRYKDAYNSVAKFSTWIYTIAGNLARTEYRRQRRQNFFSISDYGEEHQTYDLPDESYRPDVITDSGIKDEIIQKALLKVKETYREAVILRDIQGLSYEEISEILGVNEGTVKSRINRGRAQLQELLKGIYKE*