ggKbase home page

S28_scaffold_1840_curated_1

Organism: S28_RifleBG_Ignavibacteria_36_39_curated

near complete RP 49 / 55 MC: 3 BSCG 48 / 51 MC: 5 ASCG 13 / 38 MC: 3
Location: 2..160

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=721096 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria similarity UNIREF
DB: UNIREF100
  • Identity: 72.5
  • Coverage: 51.0
  • Bit_score: 83
  • Evalue 4.50e-14
Tax=RBG_16_Ignavibacteria_34_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 65.4
  • Coverage: 52.0
  • Bit_score: 76
  • Evalue 1.00e-11

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Ignavibacteria_34_14_curated → Ignavibacteriales → Ignavibacteria → Ignavibacteriae → Bacteria

Sequences

DNA sequence
Length: 159
TCACCAAAACAGAAAATGACATTTGTTCTTAAACACTATGAAGGTTATAAGATCAGGGAAATCGCAGAGATGCTGAATTGTAAGGAAGGCACGGTTAAAAAGTATCTCTTTGATGCAACAAAAAATTTGAAAAAAAAATTAAGTCCGGTTTATGCATAA
PROTEIN sequence
Length: 53
SPKQKMTFVLKHYEGYKIREIAEMLNCKEGTVKKYLFDATKNLKKKLSPVYA*