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S28_scaffold_3083_curated_3

Organism: S28_Methanosarcina_42_8_curated

near complete RP 33 / 55 MC: 6 BSCG 23 / 51 MC: 3 ASCG 36 / 38 MC: 1
Location: comp(1241..1429)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit N {ECO:0000256|HAMAP-Rule:MF_00250}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00250};; TaxID=1434110 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina horonobensis HB-1 = JCM 15518.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 62.0
  • Bit_score: 134
  • Evalue 2.90e-29
DNA-directed RNA polymerase subunit N (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 95.2
  • Coverage: 62.0
  • Bit_score: 131
  • Evalue 8.40e-29
DNA-directed RNA polymerase subunit N n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=RPON_METMA similarity UNIREF
DB: UNIREF100
  • Identity: 95.2
  • Coverage: 62.0
  • Bit_score: 131
  • Evalue 3.00e-28

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Taxonomy

Methanosarcina horonobensis → Methanosarcina → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 189
ATGATCCCAGTCCGATGTTTCTCATGTGGAAAAGTAATCTCTAACTATTGGGATGAGTACAAAAGACGCGTCAATGACGGCGAAGACTCTGCTGCAGTACTGGATGATCTCGGGATCACCCGTTACTGCTGCCGCAGAATGTTCCTCAGCCATGTCGAACTTGTTGACGTGCTCTCACCGTACCAGTAA
PROTEIN sequence
Length: 63
MIPVRCFSCGKVISNYWDEYKRRVNDGEDSAAVLDDLGITRYCCRRMFLSHVELVDVLSPYQ*