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S28_scaffold_5266_curated_2

Organism: S28_Methanosarcina_42_8_curated

near complete RP 33 / 55 MC: 6 BSCG 23 / 51 MC: 3 ASCG 36 / 38 MC: 1
Location: 1486..2487

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter permease protein n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8Q0P5_METMA similarity UNIREF
DB: UNIREF100
  • Identity: 88.0
  • Coverage: 334.0
  • Bit_score: 570
  • Evalue 6.00e-160
  • rbh
Lipoprotein releasing system transmembrane protein LolC {ECO:0000313|EMBL:AKB22304.1}; TaxID=1434102 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. WH1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.5
  • Coverage: 334.0
  • Bit_score: 580
  • Evalue 8.20e-163
ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 88.0
  • Coverage: 334.0
  • Bit_score: 570
  • Evalue 1.70e-160
  • rbh

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Taxonomy

Methanosarcina sp. WH1 → Methanosarcina → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1002
ATGCGCTATGAACTTTTTATTGCTTTCAGGCAGATCCGGGCAAGAAAATTCCAGACTCTCCTTTCGGTAGGAGCAATAGCCCTTGCCGTGATGGTACTTACGGTTTCTCAAGCTCTTATGGTGGGTTTTACAGGGGAGCTTTACAACACTACCGTGAATAAACTCCCTCACGTATCGGTTTCTCCGCAGGAAGGTGAGGATTATATCTATCTTTACAGGACTCTTACGGAAAGGATCAGTTCAATCGAAGGAGTTTCCACAGTTTCTCCTTTCCTTACCGGGCAGGCTTCTTTCAGGTTCAAGGACAATTCCCTCAACTCCGAGCTTAGAGGCATCATCCCTTCACAGGAAAATGAGATCAGCTTTATTGAAGAAGATATGGTTGAAGGCAATTTCCGGGAACTTGAGTTTTCAAGAAATACAGTGGTTATAGGCTCAAGGTTGGCAGATAAACTTGAAGTTAATCTTGGCGACTCCGTAAGTGTATCATTTCCAAATGCAAATCCTCTTTCCCTTAGAGTTGTAGGGATCTTTCATACGGGGTCTCCTCTGGACGAGTCCCTGACCTATACCTCCCTGGATACTGCCCAGGAATTTTATGACGTCACGGATGTGGTTAATGGCATCTCAGTCCGGCTCAGGGATTTTGATCAGGATCGGGAAGTCGCAGCTGAGATCGAAGAAACCGGTTATAGGGCAAGAGGCTGGACAGAAACAAACCCTGCAATCCTCCGTACCATTGCTATAGAAAGCACTTCAAACAACGTCATATACGGACTTATTATTGTCATAGCTTCTTTCGGAGTGGTCAGTACCTTGAACCTTTCGGTTATCGGAGCAACAGGCCAGATAGGTATGCTCCGCGCTATGGGTGCCTCTGTTTCAAGCATCCAGAGGATTTTCATTCTCCAGAGCGGAATCTTAGGCCTGATGGGCGCTCTCGCCGGTACTTTTGCAGGAGTCCTTATAGCTCTGGCAATAGGCCAGTATGAAATCCCGGCA
PROTEIN sequence
Length: 334
MRYELFIAFRQIRARKFQTLLSVGAIALAVMVLTVSQALMVGFTGELYNTTVNKLPHVSVSPQEGEDYIYLYRTLTERISSIEGVSTVSPFLTGQASFRFKDNSLNSELRGIIPSQENEISFIEEDMVEGNFRELEFSRNTVVIGSRLADKLEVNLGDSVSVSFPNANPLSLRVVGIFHTGSPLDESLTYTSLDTAQEFYDVTDVVNGISVRLRDFDQDREVAAEIEETGYRARGWTETNPAILRTIAIESTSNNVIYGLIIVIASFGVVSTLNLSVIGATGQIGMLRAMGASVSSIQRIFILQSGILGLMGALAGTFAGVLIALAIGQYEIPA