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S28_scaffold_6865_curated_2

Organism: S28_Methanosarcina_42_8_curated

near complete RP 33 / 55 MC: 6 BSCG 23 / 51 MC: 3 ASCG 36 / 38 MC: 1
Location: comp(552..1220)

Top 3 Functional Annotations

Value Algorithm Source
CbiM protein n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PYG9_METMA similarity UNIREF
DB: UNIREF100
  • Identity: 81.5
  • Coverage: 222.0
  • Bit_score: 368
  • Evalue 3.00e-99
  • rbh
Substrate-specific component NikM of nickel ECF transporter {ECO:0000313|EMBL:AKB13258.1}; TaxID=523844 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina thermophila TM-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.7
  • Coverage: 222.0
  • Bit_score: 384
  • Evalue 7.40e-104
Substrate-specific component NikM of nickel ECF transporter similarity KEGG
DB: KEGG
  • Identity: 83.7
  • Coverage: 221.0
  • Bit_score: 377
  • Evalue 1.80e-102

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Taxonomy

Methanosarcina thermophila → Methanosarcina → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 669
ATGCATATACCTGATCCGTTTATACCGCTTGACCAGGCAGTAATTTACTGGGTTATTGCCCTTCCTTTCATTATAATATCAATGAGATGGGCAAGAAAAGAGCTCGATGAGATGAAAGTACCGATCCTCGCTGCCCTTGCAGCAGGGATATTTGCTATCCAAGCCATGAACATCCCCATAGGTATGGGGACAAGTGGGCACATGGTCGGGGCAGCCCTTGTGGCAATTGTTTTCGGAAGTCCCTGGGCAGGAGTTCTTGTACTCACGCTCGTGCTGCTTGTGCAGGGTTTTGCCTTTGCTGACGGTGGGATCACTACAATGGGTGCGAATATCCTGAATATGGGGGTTGTTTCCGGTTTTGTAGGGTATTATACTTACGCTGTGCTCCGCCGGAGCTTGAGCATAAACATTGCAGCCTTCGGAGGTGCCTGGCTCGGGCTTTTCATCTCGTCGATTGTCTGCGCAGTTCAGATGTGGATTGCAGGTACTTTCCCTCTGGTTCCGGGGCTTATGGCAATGGGGACCTTCCACCTGATAATCGGTTTTATAGGAGAAGGATTGATCACCTCAATAGTGATAGCAGCTATTGCAAAATCCCGTCCTGACCTTCTGGAAGAAGAGAGCCCGAAAGCCAGAAAAGATAGAGCTGAAATGGAGGCCATGGCGTGA
PROTEIN sequence
Length: 223
MHIPDPFIPLDQAVIYWVIALPFIIISMRWARKELDEMKVPILAALAAGIFAIQAMNIPIGMGTSGHMVGAALVAIVFGSPWAGVLVLTLVLLVQGFAFADGGITTMGANILNMGVVSGFVGYYTYAVLRRSLSINIAAFGGAWLGLFISSIVCAVQMWIAGTFPLVPGLMAMGTFHLIIGFIGEGLITSIVIAAIAKSRPDLLEEESPKARKDRAEMEAMA*