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S28_scaffold_5892_curated_1

Organism: S28_Methanosarcina_42_8_curated

near complete RP 33 / 55 MC: 6 BSCG 23 / 51 MC: 3 ASCG 36 / 38 MC: 1
Location: 3..722

Top 3 Functional Annotations

Value Algorithm Source
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5.1.3 {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826};; Thiamine-phosphate pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; TaxID=1434110 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina horonobensis HB-1 = JCM 15518.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.7
  • Coverage: 237.0
  • Bit_score: 386
  • Evalue 2.80e-104
Thiamin-phosphate pyrophosphorylase (EC:2.5.1.3) similarity KEGG
DB: KEGG
  • Identity: 80.4
  • Coverage: 235.0
  • Bit_score: 365
  • Evalue 6.00e-99
Thiamine-phosphate synthase n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=THIE_METAC similarity UNIREF
DB: UNIREF100
  • Identity: 83.0
  • Coverage: 223.0
  • Bit_score: 357
  • Evalue 9.80e-96
  • rbh

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Taxonomy

Methanosarcina horonobensis → Methanosarcina → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 720
AACTGCAATCAGAAAAATTCCGATAAAATGAATTCTAATCAGAAAGATCTATCCCAGAAAGATCTCTCCCAGAAATATTCTCTTTTAAAAGAGATCGATTTTTATCTTGTGACAGACTCCGGGCTCTCAAAGAAAGGGACTTTATnnnnnnnnnnnnnnnnnnnnGAAGCAGGCTGCAAGATTATTCAATACCGCGAGAAAAACAAGAGTACAAAAGAGATGATCGATGAAGCATTCGAAATCAAGAGAATCTGCAGGGATAGAGCAATTTTTCTCGTAAATGACAGAATTGATGTTGCTTTAGCAGTTGATGCGGATGGAGTCCATATAGGTCAGGATGACATGCCGATTGAAACTGCAAAAAAACTTCTGGGCCCGGATAAGATAATCGGCCTTACTGTCCACAACGTTGATGAAGCAATCGAAGCAGAAAAAAGTGGAGCTGATTATGTAGGTCTCGGCTCAATATTTGATACTGCTACTAAAAAAGATGCAGGAAAAGGGATTGGGCCTGTCAGAATAAGAGACGTCAAAAACGCGATAAGAATCCCTGTAGTTGCTATTGGCGGAATTAATAAAGAGAACTGCAGGACCGTTATTGAAAACGGTGCTGACAGTCTTGTTGCAATCTCTGCAATTGTATGCAGCGGCGATGTAAAAAAGGAAACCAGAGAGTTCATTAATATTATTCGGGAAGTAAAAAGCCCAAGTAGTCCATAA
PROTEIN sequence
Length: 240
NCNQKNSDKMNSNQKDLSQKDLSQKYSLLKEIDFYLVTDSGLSKKGTLXXXXXXXEAGCKIIQYREKNKSTKEMIDEAFEIKRICRDRAIFLVNDRIDVALAVDADGVHIGQDDMPIETAKKLLGPDKIIGLTVHNVDEAIEAEKSGADYVGLGSIFDTATKKDAGKGIGPVRIRDVKNAIRIPVVAIGGINKENCRTVIENGADSLVAISAIVCSGDVKKETREFINIIREVKSPSSP*