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S28_scaffold_2690_curated_1

Organism: S28_Methanosarcina_42_8_curated

near complete RP 33 / 55 MC: 6 BSCG 23 / 51 MC: 3 ASCG 36 / 38 MC: 1
Location: comp(940..2049)

Top 3 Functional Annotations

Value Algorithm Source
Type 2 DNA topoisomerase 6 subunit A {ECO:0000256|HAMAP-Rule:MF_00132}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00132};; Type II DNA topoisomerase VI subunit A {ECO:0000256|HAMAP-Rule:MF_00132}; TaxID=1434102 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. WH1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.3
  • Coverage: 369.0
  • Bit_score: 716
  • Evalue 1.80e-203
DNA topoisomerase VI subunit A (EC:5.99.1.3) similarity KEGG
DB: KEGG
  • Identity: 95.9
  • Coverage: 369.0
  • Bit_score: 711
  • Evalue 1.20e-202
Type 2 DNA topoisomerase 6 subunit A n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=TOP6A_METMA similarity UNIREF
DB: UNIREF100
  • Identity: 93.2
  • Coverage: 369.0
  • Bit_score: 698
  • Evalue 2.80e-198
  • rbh

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Taxonomy

Methanosarcina sp. WH1 → Methanosarcina → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1110
ATGGCAAGAGTATCAAATAGCAAAACAAGACAGGGAGATGCCCTGGCAAAGGAAAGGCTGCTTGAGCTTGCAGAAAAGATCTATAACCAGTTTGAAGATGAGATTATCCCGAGCGTCAGCCTTCCGAGCCGGACCAAGGCAAACATAGAATATTCCGATGAGAGCGATGTCTGGGTCTACGGGGATAGGGAGAGCGAAAGGAGTGCAAAGACCGTAAAAGGCGCATTTCAGCTCCTGAAAACTACTTATGCGACAGATTTCCTCATAAACGAACACCTTTCCCAGAACCGCGGCTCAACACTTCGAGAACTTTACTACATCTCCGAGGGCTGGGACGCTGCCAAGTTCAAAGAACAGGCTGAAAGCGACCGCCTGATTGAAGACCTGGAACTCCTGACCAGCCTCCAGAGGGAGTATTTCCACATGCGTCCTGAAGAAGATGGGGCTACGATGTTCGGGCCGATTGAGATCTCGGAACAGACAAAACGCGGCGAGCGGAATATCCACTGCCAGAAGGATGTAGGGGAAGGGGGATATCAGATCCCTTTCAATGTAGAAAATATCGAGTTTAAGAGCCACGACGCAAGCATGATTATAGCTATAGAAACCGGCGGTATGTATGCAAGGTTGATGGAAAACGGGTTTGATGAGGCTTATAATGCGATTCTCGTCCATTTAAAGGGCCAGCCTGCTCGGTCAACCCGCAGGATGATCAAGCGTATGAACGAGGAGCTGGGGATTCCTGTAGCAGTTTTTACTGACGGCGATCCATGGTCTTACAGGATCTATGCATCTGTTGCTTACGGAGCTATAAAAAGTGCTCATCTTTCGGAATTCATGGCAACACCTGCAGCCAAATTCCTGGGACTTCAGCCCTCGGATATTGTGGAGTACGAACTCTCAACTGACAAACTCACCGAGCAAGATGTAAGTGCACTGAGGAGTGAACTTTCCGATCCTCGCTTTGAGACTGATTACTGGAAAGAGCAGATCCAGCTCCAGCTCGATATAGGTAAGAAGGCTGAACAACAAGCTTTTGCAGGAAAAGGCCTGGACTTCGTAACCGAGGTATATCTTCCGAACCGGCTCAAAGAGCTGGGAATGGTGTAA
PROTEIN sequence
Length: 370
MARVSNSKTRQGDALAKERLLELAEKIYNQFEDEIIPSVSLPSRTKANIEYSDESDVWVYGDRESERSAKTVKGAFQLLKTTYATDFLINEHLSQNRGSTLRELYYISEGWDAAKFKEQAESDRLIEDLELLTSLQREYFHMRPEEDGATMFGPIEISEQTKRGERNIHCQKDVGEGGYQIPFNVENIEFKSHDASMIIAIETGGMYARLMENGFDEAYNAILVHLKGQPARSTRRMIKRMNEELGIPVAVFTDGDPWSYRIYASVAYGAIKSAHLSEFMATPAAKFLGLQPSDIVEYELSTDKLTEQDVSALRSELSDPRFETDYWKEQIQLQLDIGKKAEQQAFAGKGLDFVTEVYLPNRLKELGMV*