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S28_scaffold_5933_curated_1

Organism: S28_Methanosarcina_42_8_curated

near complete RP 33 / 55 MC: 6 BSCG 23 / 51 MC: 3 ASCG 36 / 38 MC: 1
Location: comp(3..389)

Top 3 Functional Annotations

Value Algorithm Source
Geranylgeranyl diphosphate reductase (EC:1.3.1.83) similarity KEGG
DB: KEGG
  • Identity: 93.0
  • Coverage: 129.0
  • Bit_score: 235
  • Evalue 8.60e-60
Geranylgeranyl diphosphate reductase {ECO:0000313|EMBL:AKB73882.1}; EC=1.3.1.83 {ECO:0000313|EMBL:AKB73882.1};; TaxID=1434111 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina lacustris Z-7289.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.0
  • Coverage: 129.0
  • Bit_score: 235
  • Evalue 4.20e-59
Bacteriochlorophyll synthase n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TJ94_METAC similarity UNIREF
DB: UNIREF100
  • Identity: 89.1
  • Coverage: 129.0
  • Bit_score: 229
  • Evalue 9.70e-58

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Taxonomy

Methanosarcina lacustris → Methanosarcina → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 387
ATGATTCCAAAAGCCTCTTACGATGTCATCGTTGTGGGTGCAGGCCCCGCGGGTTCCACTGCTGCCCTTTATGCCGCAAGGAATGGAGCTTCTGTCCTTCTTCTTGATAAAAAAAGGGAAATTGGAAGCCCTATTCAGTGTGCAGGTTTTCTCCCCGATGCCTCGGAAGTCCAGGCTCTGCTGCCTGATGCCGAATTGCCGGAGACCCTGAAAAACTATCCAGATTCCTGCGTGCTACAGAATATCAAAACCCAGCGGATCATTCCCCCAAACGGCAGTGTAAAAGAGTTTGCAGTCAGGGGAGCTGTCCTTGACCGGCGCAGGTACGACCAGCTCCTCGCCGGGCAAGCGGCAGAGGCAGGGGCTGAACTTATGGTAAAGACCCGT
PROTEIN sequence
Length: 129
MIPKASYDVIVVGAGPAGSTAALYAARNGASVLLLDKKREIGSPIQCAGFLPDASEVQALLPDAELPETLKNYPDSCVLQNIKTQRIIPPNGSVKEFAVRGAVLDRRRYDQLLAGQAAEAGAELMVKTR