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S28_scaffold_787_curated_7

Organism: S28_Methanosarcina_42_8_curated

near complete RP 33 / 55 MC: 6 BSCG 23 / 51 MC: 3 ASCG 36 / 38 MC: 1
Location: comp(6102..7226)

Top 3 Functional Annotations

Value Algorithm Source
Geranylgeranyl diphosphate reductase (EC:1.3.1.83) similarity KEGG
DB: KEGG
  • Identity: 85.3
  • Coverage: 374.0
  • Bit_score: 659
  • Evalue 3.10e-187
Geranylgeranyl diphosphate reductase {ECO:0000313|EMBL:AKB73682.1}; EC=1.3.1.83 {ECO:0000313|EMBL:AKB73682.1};; TaxID=1434111 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina lacustris Z-7289.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.3
  • Coverage: 374.0
  • Bit_score: 659
  • Evalue 1.50e-186
Geranylgeranyl reductase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46C43_METBF similarity UNIREF
DB: UNIREF100
  • Identity: 79.9
  • Coverage: 374.0
  • Bit_score: 627
  • Evalue 7.90e-177
  • rbh

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Taxonomy

Methanosarcina lacustris → Methanosarcina → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1125
ATGTATGATGTAATCATCGTAGGTGGTGGCCCTTCCGGAGCCTCGGCCGGGAGAAGGGCGGGAAAACTTGGTCTTAATACGCTGCTACTTGAAAAGGAAGAATTCCCCAGGTACAAACCCTGTGGAGGAGGACTCTCGAAACATGCGATTTCTTACCTTGATTTCGAGCTCCCTGAGGATGTTATTGAGTGGGAAATTACAGGGGCAAGGGTCTTTTACAnnnnnnnnnnnnnCGAGGCACATAAAGATTACCTGTTGTCTGTTCTTGTATCTCGGGACATGTTTGATAATTTCCTTCTTGAAAAAGCAAAGGAAACCGGAATTGAAGTCCATACACGGGAAAAGGCGCTTTGTTGCAGGGAAATGCCCGAATATGTCGAAGTCGAGTCTAGCAGGGGCACATATAGGGCAAAATTTGCAATCGTTTCCGAAGGAGCACAGGGACTCGTCAAAACGTGTGTAAGGCCTGCGGATACTAAAGAGGAGTATGGGATCTGTATGGTCGCCGAAGTCCCTGCAGAGGAAAACGAAATTAAAGAAAGACTGGGAAGGGCAATTGAACTGCATTTTGGTGTTGTCGGAGGAGGGTACGGCTGGATCTTTCCCCATAAAACCTATTATTCTGTCGGAATTGGCGGAGTTGTAAAAGACCTTTCCCATCCAAAGGAAACAATGCTTGAGTTCCTGAGGGTAAACGGCTTCAGAGGCGAGTACAAACTGCACGGTCACAAGATCCCCTGGGGCGGAATTAAGCGAAAAGTTTCCGGCTCGAGGGTCCTCCTGAGCGGGGATGCTGCAGGTTTCGTTGATTCTTTCTCTGGGGAAGGGCTGGCTTATGCTATCAGTTCCGGGCAGTTTGCTGCTGAAGTAATTGCCGAAATTTGCCTGCATAATGGTAAAACAAAATACCTGAATAGATATGAGTCCCTCTGTCAGGCGGAGTTTGGAACACATCTTAAGTATTCCCTTATGTTTTCCAAAATAATGCATCGCTTCCCTGAGAAGACATTTAAAATCTTCACATCAAGTGATAAAATGATTGATAAATACCTTGAAGTTGCGGATTTCAGCATTAATTATAAGGATTATCTTCGTTGGTCCCTTCTGAATTTTAAACTCAGGTAA
PROTEIN sequence
Length: 375
MYDVIIVGGGPSGASAGRRAGKLGLNTLLLEKEEFPRYKPCGGGLSKHAISYLDFELPEDVIEWEITGARVFYXXXXXEAHKDYLLSVLVSRDMFDNFLLEKAKETGIEVHTREKALCCREMPEYVEVESSRGTYRAKFAIVSEGAQGLVKTCVRPADTKEEYGICMVAEVPAEENEIKERLGRAIELHFGVVGGGYGWIFPHKTYYSVGIGGVVKDLSHPKETMLEFLRVNGFRGEYKLHGHKIPWGGIKRKVSGSRVLLSGDAAGFVDSFSGEGLAYAISSGQFAAEVIAEICLHNGKTKYLNRYESLCQAEFGTHLKYSLMFSKIMHRFPEKTFKIFTSSDKMIDKYLEVADFSINYKDYLRWSLLNFKLR*