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S28_scaffold_12727_curated_1

Organism: S28_Methanosarcina_42_8_curated

near complete RP 33 / 55 MC: 6 BSCG 23 / 51 MC: 3 ASCG 36 / 38 MC: 1
Location: comp(576..1181)

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent RNA helicase n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PU01_METMA similarity UNIREF
DB: UNIREF100
  • Identity: 97.0
  • Coverage: 201.0
  • Bit_score: 357
  • Evalue 4.80e-96
  • rbh
putative ATP-dependent RNA helicase similarity KEGG
DB: KEGG
  • Identity: 97.5
  • Coverage: 201.0
  • Bit_score: 362
  • Evalue 5.50e-98
Putative ATP-dependent RNA helicase {ECO:0000313|EMBL:AKB43598.1}; TaxID=1434123 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina vacuolata Z-761.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.5
  • Coverage: 201.0
  • Bit_score: 362
  • Evalue 2.70e-97

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Taxonomy

Methanosarcina vacuolata → Methanosarcina → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 606
TCAACAGAGTCTTATATCGACCCGCAAAAATTGAATCAGGTCGTTTATAAAGTACAGGATGACATGAAATTATCTCTGCTCGTGTATCTTCTGCAAAATGAGAAGTCAAACCTCGGGATGGTTTTCTGCAACACAAAAAGAnnnnnnnnnnnnnnnnnnnnnnnnCTGAGAAAATCAAGTATCAATGCCGTGGCAATTCATGGCGGATTGACACAGAACGAACGAACTCGCATAATGGAAAAATTCCATTCCGGGAACATATGTGTCCTTGTATGCACAGATGTAGCCGGAAGAGGACTTGATATACAGGGTGTTTCCCATGTTTACAATTATGATATTCCCAGGGAGAGTAAACAGTATATTCACAGGATTGGAAGAACTGCACGAGCAGGAACAnnnnnnnnnnnnnnnnnnnnnnTTTCCAAAAATGACCATGATAATTTCATGAGTGTGCTGAAAGACAATGATGTGGATATTAAGGAACAGGCACTACCTGCTCTGAAGAAGATTGTAATTGAAAGACCGGAAATAAAATTGCCAAAGCCGGTAAATAGGATGAACAACCCCTCCAGAAAAGGTCATAAACCCAGGCACAAAAACTGTTAG
PROTEIN sequence
Length: 202
STESYIDPQKLNQVVYKVQDDMKLSLLVYLLQNEKSNLGMVFCNTKRXXXXXXXXLRKSSINAVAIHGGLTQNERTRIMEKFHSGNICVLVCTDVAGRGLDIQGVSHVYNYDIPRESKQYIHRIGRTARAGTXXXXXXXXSKNDHDNFMSVLKDNDVDIKEQALPALKKIVIERPEIKLPKPVNRMNNPSRKGHKPRHKNC*